RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NMT2O60551 498 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 VAV2P52735 878 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 AMPD3Q01432 767 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 TRIM58Q8NG06 486 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 AFAP1L1Q8TED9 768 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 FAM204AQ9H8W3 233 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 TCP11L1Q9NUJ3 509 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 CASZ1Q86V15 1759 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 CCDC88AQ3V6T2 1871 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 ABCB11O95342 1321 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 ROBO3Q96MS0 1386 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
RTN4-204ENST00000357732 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
RTN4-204ENST00000357732 RNF40O75150 1001 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 PRPF6O94906 941 aaKnown RBP19.78■□□□□ 0.76
RTN4-204ENST00000357732 TBC1D8BQ0IIM8 1120 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 KIF5AQ12840 1032 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 FAM47AQ5JRC9 791 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 DUSP9Q99956 384 aaKnown RBP19.78■□□□□ 0.76
RTN4-204ENST00000357732 C7orf25Q9BPX7 421 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 PCDHA6Q9UN73 950 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 PCDHA8Q9Y5H6 950 aa19.78■□□□□ 0.76
RTN4-204ENST00000357732 SPATA31A1Q5TZJ5 1347 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 MYH1P12882 1939 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 B4DLN1 442 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 PES1O00541 588 aaKnown RBP19.77■□□□□ 0.76
RTN4-204ENST00000357732 SYF2O95926 243 aaKnown RBP19.77■□□□□ 0.76
RTN4-204ENST00000357732 KLRK1P26718 216 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 PNMA1Q8ND90 353 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 CELF1Q92879 486 aaKnown RBP19.77■□□□□ 0.76
RTN4-204ENST00000357732 BARHL2Q9NY43 387 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 JRKLQ9Y4A0 524 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 ROBO1Q9Y6N7 1651 aa19.77■□□□□ 0.76
RTN4-204ENST00000357732 ENC1O14682 589 aa19.77■□□□□ 0.75
RTN4-204ENST00000357732 FKBP15Q5T1M5 1219 aa19.77■□□□□ 0.75
RTN4-204ENST00000357732 AMOTL1Q8IY63 956 aa19.77■□□□□ 0.75
RTN4-204ENST00000357732 USO1O60763 962 aaKnown RBP19.76■□□□□ 0.75
RTN4-204ENST00000357732 SPA17Q15506 151 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 MMGT1Q8N4V1 131 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 SECISBP2LQ93073 1101 aaKnown RBP19.76■□□□□ 0.75
RTN4-204ENST00000357732 HDAC6Q9UBN7 1215 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 ZNF831Q5JPB2 1677 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 TAF1P21675 1872 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 SPTY2D1Q68D10 685 aaPredicted RBP19.76■□□□□ 0.75
RTN4-204ENST00000357732 CNNM4Q6P4Q7 775 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 CCNI2Q6ZMN8 369 aaPredicted RBP19.76■□□□□ 0.75
RTN4-204ENST00000357732 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 BBXQ8WY36 941 aaPredicted RBP19.76■□□□□ 0.75
RTN4-204ENST00000357732 CNOT6LQ96LI5 555 aaKnown RBP19.76■□□□□ 0.75
RTN4-204ENST00000357732 CRACR2AQ9BSW2 395 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 TRIM9Q9C026 710 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 ANKRD2Q9GZV1 360 aa19.76■□□□□ 0.75
RTN4-204ENST00000357732 FLT1P17948 1338 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 ZC3H4Q9UPT8 1303 aaKnown RBP19.75■□□□□ 0.75
RTN4-204ENST00000357732 KCNQ2O43526 872 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 VEGFAP15692 232 aaPredicted RBP19.75■□□□□ 0.75
RTN4-204ENST00000357732 TNNT3P45378 269 aaPredicted RBP19.75■□□□□ 0.75
RTN4-204ENST00000357732 SLC10A5Q5PT55 438 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 ARHGAP27Q6ZUM4 889 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 KRT25Q7Z3Z0 450 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 CAGE1Q8TC20 777 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 TMEM60Q9H2L4 133 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 PLAGL2Q9UPG8 496 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 ADAMTS3O15072 1205 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 IDEP14735 1019 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 FOXR2Q6PJQ5 311 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 CABP7Q86V35 215 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 AGPAT5Q9NUQ2 364 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 MAD2L2Q9UI95 211 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 FAM184BQ9ULE4 1060 aa19.75■□□□□ 0.75
RTN4-204ENST00000357732 RASSF10A6NK89 507 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 TACC1O75410 805 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 LCA5LO95447 670 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 CYP2D6P10635 497 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 GPKOWQ92917 476 aaPredicted RBP eCLIP19.74■□□□□ 0.75
RTN4-204ENST00000357732 CCDC42Q96M95 316 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 NOC4LQ9BVI4 516 aaKnown RBP19.74■□□□□ 0.75
RTN4-204ENST00000357732 SNX12Q9UMY4 172 aa19.74■□□□□ 0.75
RTN4-204ENST00000357732 STXBP3O00186 592 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 FGFR1OPO95684 399 aaKnown RBP19.73■□□□□ 0.75
RTN4-204ENST00000357732 OR52Z1P0C646 297 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 HIBADHP31937 336 aaKnown RBP19.73■□□□□ 0.75
RTN4-204ENST00000357732 MTIF2P46199 727 aaKnown RBP19.73■□□□□ 0.75
RTN4-204ENST00000357732 PDE4DQ08499 809 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 MIIPQ5JXC2 388 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 C12orf60Q5U649 245 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 LRRC31Q6UY01 552 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 CCDC155Q8N6L0 562 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 LACRTQ9GZZ8 138 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 COL5A3P25940 1745 aaPredicted RBP19.73■□□□□ 0.75
RTN4-204ENST00000357732 SHOX2O60902 331 aaPredicted RBP19.73■□□□□ 0.75
RTN4-204ENST00000357732 KCNQ4P56696 695 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 TFAP4Q01664 338 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 CCDC84Q86UT8 332 aaPredicted RBP19.73■□□□□ 0.75
RTN4-204ENST00000357732 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 SELENOOQ9BVL4 669 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 FAM107BQ9H098 131 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 ZMYND12Q9H0C1 365 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms