RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 ASTN1O14525 1302 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 GBF1Q92538 1859 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 PATL2C9JE40 543 aaKnown RBP10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 TNFRSF10AO00220 468 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 RNF113AO15541 343 aaKnown RBP10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 PLA2G6O60733 806 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 CABYRO75952 493 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 ACRP10323 421 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 BMP3P12645 472 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 CNTN2Q02246 1040 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 SLFN13Q68D06 897 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 CCDC129Q6ZRS4 1044 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 STK11IPQ8N1F8 1099 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 NEDD1Q8NHV4 660 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 GAS2L1Q99501 681 aaPredicted RBP10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 SEZ6LQ9BYH1 1024 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 IL23AQ9NPF7 189 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 CTDP1Q9Y5B0 961 aaPredicted RBP10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZNF536O15090 1300 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 GRIN2DO15399 1336 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 PLIN4Q96Q06 1357 aa10.23□□□□□ -0.77
COL4A3BP-202ENST00000357457 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 ASB14A6NK59 587 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 TULP1O00294 542 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 STK25O00506 426 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 TLR3O15455 904 aaKnown RBP10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 GPAA1O43292 621 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 PRDM1O75626 825 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 CYP2C18P33260 490 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 TKFCQ3LXA3 575 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 CHURC1Q8WUH1 139 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 STAG1Q8WVM7 1258 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 ACAD9Q9H845 621 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 Q9Y3F1 56 aa10.22□□□□□ -0.77
COL4A3BP-202ENST00000357457 PRRC2BQ5JSZ5 2229 aaKnown RBP10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 TMEM232C9JQI7 657 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 FGBP02675 491 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 STAT2P52630 851 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 BEX3Q00994 111 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 RAB30Q15771 203 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 IQSEC1Q6DN90 963 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 CXCL17Q6UXB2 119 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 VWCEQ96DN2 955 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 GMCL1Q96IK5 515 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 ASB2Q96Q27 587 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 PRDM12Q9H4Q4 367 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 DCTPP1Q9H773 170 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 MSRAQ9UJ68 235 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
COL4A3BP-202ENST00000357457 TCF20Q9UGU0 1960 aaKnown RBP10.21□□□□□ -0.78
COL4A3BP-202ENST00000357457 M0R2C6 588 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 SMPD1P17405 629 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 TDO2P48775 406 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 MRPS5P82675 430 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 TFAP4Q01664 338 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 PDE4BQ07343 736 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 ITGA7Q13683 1181 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 FSCN1Q16658 493 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 TLK2Q86UE8 772 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 HS6ST3Q8IZP7 471 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 MORC4Q8TE76 937 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 TRERF1Q96PN7 1200 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 NOC4LQ9BVI4 516 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 HIPK3Q9H422 1215 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 HOMER2Q9NSB8 354 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 RNF146Q9NTX7 359 aa10.2□□□□□ -0.78
COL4A3BP-202ENST00000357457 LCTP09848 1927 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 UMODL1Q5DID0 1318 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 DYNC1LI2O43237 492 aaPredicted RBP10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 ZEB2O60315 1214 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 B4GALT4O60513 344 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 APPP05067 770 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 TSPY3P0CV98 308 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 TSPY8P0CW00 308 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 MCCP23508 829 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 SLC1A4P43007 532 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 NOVP48745 357 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 TMEM63BQ5T3F8 832 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 RCSD1Q6JBY9 416 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 NOL8Q76FK4 1167 aaKnown RBP10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms