RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 EEF2KMTQ96G04 330 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 HAUS4Q9H6D7 363 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 MRPL11Q9Y3B7 192 aaKnown RBP13.64□□□□□ -0.23
COLCA1-201ENST00000355430 MCTP2Q6DN12 878 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 KLHL7Q8IXQ5 586 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 IFT74Q96LB3 600 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 CCZ1BP86790 482 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 CCZ1P86791 482 aaPredicted RBP13.64□□□□□ -0.23
COLCA1-201ENST00000355430 INF2Q27J81 1249 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 HAUS3Q68CZ6 603 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 LCORLQ8N3X6 602 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 FAM71BQ8TC56 605 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 SNX29Q8TEQ0 813 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 SMTNP53814 917 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 ZRSR2Q15696 482 aaKnown RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 SLC9C1Q4G0N8 1177 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 CPLX4Q7Z7G2 160 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 CCDC114Q96M63 670 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 MORC2Q9Y6X9 1032 aaPredicted RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 SALL3Q9BXA9 1300 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 TLDC2A0PJX2 215 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 IFNAR1P17181 557 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 MCAMP43121 646 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 ALAS1P13196 640 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 INPP5BP32019 993 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 EPSTI1Q96J88 318 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 NLRC4Q9NPP4 1024 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 SRPRBQ9Y5M8 271 aaKnown RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 DCCP43146 1447 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 ARHGEF16Q5VV41 709 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 RNF26Q9BY78 433 aaPredicted RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
COLCA1-201ENST00000355430 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
COLCA1-201ENST00000355430 SLFN14P0C7P3 912 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 CYP19A1P11511 503 aaPredicted RBP13.62□□□□□ -0.23
COLCA1-201ENST00000355430 CALCRLQ16602 461 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 SPOUT1Q5T280 376 aaKnown RBP13.62□□□□□ -0.23
COLCA1-201ENST00000355430 SYNCQ9H7C4 482 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 NEDD4P46934 1319 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 GYS2P54840 703 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 APOBEC3FQ8IUX4 373 aaKnown RBP13.62□□□□□ -0.23
COLCA1-201ENST00000355430 NELFCDQ8IXH7 590 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 EPC1Q9H2F5 836 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 AP5Z1O43299 807 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 DDAH1O94760 285 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 FAM204AQ9H8W3 233 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 GINS2Q9Y248 185 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
COLCA1-201ENST00000355430 CFAP221Q4G0U5 840 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 CEP57Q86XR8 500 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 PANX2Q96RD6 677 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 FERMT1Q9BQL6 677 aa13.62□□□□□ -0.23
COLCA1-201ENST00000355430 ZMYND10O75800 440 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
COLCA1-201ENST00000355430 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 CHMP2AO43633 222 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 TECP42680 631 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 PAK2Q13177 524 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 SFMBT2Q5VUG0 894 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 MED4Q9NPJ6 270 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
COLCA1-201ENST00000355430 GNGT1P63211 74 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 BUB1O43683 1085 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 LONP1P36776 959 aaKnown RBP13.61□□□□□ -0.23
COLCA1-201ENST00000355430 PRPHP41219 470 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 CCDC117Q8IWD4 279 aaPredicted RBP13.61□□□□□ -0.23
COLCA1-201ENST00000355430 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 VIRMAQ69YN4 1812 aaKnown RBP13.61□□□□□ -0.23
COLCA1-201ENST00000355430 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 CEP104O60308 925 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 CDC27P30260 824 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 HNRNPH2P55795 449 aaKnown RBP13.61□□□□□ -0.23
COLCA1-201ENST00000355430 ANKS4BQ8N8V4 417 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 GLG1Q92896 1179 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
COLCA1-201ENST00000355430 SMCO2A6NFE2 343 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 PCP11498 1178 aaKnown RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 RASGRP4Q8TDF6 673 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 DPF2Q92785 391 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms