RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 MRPL12P52815 198 aaKnown RBP23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 OAZ1P54368 228 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 DNM1Q05193 864 aaKnown RBP23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 HHIPL1Q96JK4 782 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 PCDHA6Q9UN73 950 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 MRPL11Q9Y3B7 192 aaKnown RBP23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 PCDHA8Q9Y5H6 950 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 MYSM1Q5VVJ2 828 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 LBX2Q6XYB7 198 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 ANKRD23Q86SG2 305 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 RASGRP4Q8TDF6 673 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 CCDC102AQ96A19 550 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 SLC45A1Q9Y2W3 748 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 TESPA1A2RU30 521 aaPredicted RBP23.05■■□□□ 1.28
SIGMAR1-202ENST00000353468 HERVK_113P62684 666 aa23.05■■□□□ 1.28
SIGMAR1-202ENST00000353468 TMEM132BQ14DG7 1078 aa23.05■■□□□ 1.28
SIGMAR1-202ENST00000353468 MB21D1Q8N884 522 aa23.05■■□□□ 1.28
SIGMAR1-202ENST00000353468 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
SIGMAR1-202ENST00000353468 ZNF214Q9UL59 606 aaPredicted RBP23.05■■□□□ 1.28
SIGMAR1-202ENST00000353468 MANSC4A6NHS7 340 aaPredicted RBP23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 FAM155AB1AL88 458 aaPredicted RBP23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 PDHXO00330 501 aa23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 ATP2A1O14983 1001 aa23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 ALAS1P13196 640 aa23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 EARS2Q5JPH6 523 aaKnown RBP23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 REXO1Q8N1G1 1221 aaKnown RBP23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 BIN2Q9UBW5 565 aaPredicted RBP23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 COL11A1P12107 1806 aaPredicted RBP23.04■■□□□ 1.28
SIGMAR1-202ENST00000353468 OPLAHO14841 1288 aa23.03■■□□□ 1.28
SIGMAR1-202ENST00000353468 NOM1Q5C9Z4 860 aaKnown RBP23.03■■□□□ 1.28
SIGMAR1-202ENST00000353468 POTEEQ6S8J3 1075 aa23.03■■□□□ 1.28
SIGMAR1-202ENST00000353468 PIK3AP1Q6ZUJ8 805 aa23.03■■□□□ 1.28
SIGMAR1-202ENST00000353468 ZNF396Q96N95 335 aaPredicted RBP23.03■■□□□ 1.28
SIGMAR1-202ENST00000353468 PTPN18Q99952 460 aa23.03■■□□□ 1.28
SIGMAR1-202ENST00000353468 TCHHQ07283 1943 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 CCDC194A0A1B0GVG4 234 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 CLK2P49760 499 aaKnown RBP23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 KRT85P78386 507 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 UBE2SQ16763 222 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 JAKMIP3Q5VZ66 844 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 ATL3Q6DD88 541 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 TEX13BQ9BXU2 312 aa23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 TFIP11Q9UBB9 837 aaKnown RBP23.02■■□□□ 1.28
SIGMAR1-202ENST00000353468 FAM205CA6NFA0 338 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 MEIS2O14770 477 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 NCLP19338 710 aaKnown RBP23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 STAT3P40763 770 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 APLP1P51693 650 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 PLS1Q14651 629 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 SNRNP48Q6IEG0 339 aaKnown RBP23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 USP17L6PQ6QN14 398 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 KRT25Q7Z3Z0 450 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 TEX2Q8IWB9 1127 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 FAM43AQ8N2R8 423 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 CLEC4DQ8WXI8 215 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 TRERF1Q96PN7 1200 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 TMEM260Q9NX78 707 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 BTBD7Q9P203 1132 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 CNPY2Q9Y2B0 182 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 RIPK3Q9Y572 518 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 RILPL1Q5EBL4 403 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 USP28Q96RU2 1077 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 CREBZFQ9NS37 354 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 CFAP45Q9UL16 551 aa23.01■■□□□ 1.27
SIGMAR1-202ENST00000353468 MYH15Q9Y2K3 1946 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 PIK3CDO00329 1044 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 CYP2C8P10632 490 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 INHBEP58166 350 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 TKFCQ3LXA3 575 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 MUM1L1Q5H9M0 696 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 GTF3C2Q8WUA4 911 aaPredicted RBP23■■□□□ 1.27
SIGMAR1-202ENST00000353468 TBC1D5Q92609 795 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 PAGR1Q9BTK6 254 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 HOMER2Q9NSB8 354 aa23■■□□□ 1.27
SIGMAR1-202ENST00000353468 NOL7Q9UMY1 257 aaKnown RBP23■■□□□ 1.27
SIGMAR1-202ENST00000353468 GCOM1H8Y6P7 765 aaPredicted RBP22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 CFBP00751 764 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 POLR2MP0CAP2 368 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 TOB1P50616 345 aaPredicted RBP22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 NONOQ15233 471 aaKnown RBP eCLIP22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 MCTP2Q6DN12 878 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 PAXIP1Q6ZW49 1069 aaPredicted RBP22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 MCF2L2Q86YR7 1114 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 RNF146Q9NTX7 359 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 RBPJLQ9UBG7 517 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 RABGAP1Q9Y3P9 1069 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 A0A0G2JMZ2 1700 aa22.99■■□□□ 1.27
SIGMAR1-202ENST00000353468 NFIBO00712 420 aa22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 PEX10O60683 326 aa22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 CNMDO75829 334 aa22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 AP3B2Q13367 1082 aa22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 RIOX2Q8IUF8 465 aa22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 SMCR8Q8TEV9 937 aaPredicted RBP22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 FTOQ9C0B1 505 aaKnown RBP eCLIP22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 SPATC1LQ9H0A9 340 aa22.98■■□□□ 1.27
SIGMAR1-202ENST00000353468 FIBPO43427 364 aa22.97■■□□□ 1.27
SIGMAR1-202ENST00000353468 ATP2B1P20020 1258 aa22.97■■□□□ 1.27
SIGMAR1-202ENST00000353468 HOXA13P31271 388 aaPredicted RBP22.97■■□□□ 1.27
SIGMAR1-202ENST00000353468 MCM4P33991 863 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms