RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SPDYE5A6NIY4 337 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 STXBP3O00186 592 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 TCP1P17987 556 aaKnown RBP14.65□□□□□ -0.06
IFT88-202ENST00000351808 PPP2R2AP63151 447 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 EPHA10Q5JZY3 1008 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 RRAGBQ5VZM2 374 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 TRIM68Q6AZZ1 485 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 MTHFD1LQ6UB35 978 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 MB21D2Q8IYB1 491 aaPredicted RBP14.65□□□□□ -0.06
IFT88-202ENST00000351808 GALNT15Q8N3T1 639 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 BABAM1Q9NWV8 329 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 VPS54Q9P1Q0 977 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 CAPN11Q9UMQ6 739 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 ALKQ9UM73 1620 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 METAP2P50579 478 aaKnown RBP eCLIP14.65□□□□□ -0.06
IFT88-202ENST00000351808 MXRA7P84157 204 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 SPAG1Q07617 926 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 NOSTRINQ8IVI9 506 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 KCNV2Q8TDN2 545 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 TEKT4Q8WW24 435 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 KCNMB3Q9NPA1 279 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 A8MUI8 341 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 DCDC2CA8MYV0 355 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 ZNF263O14978 683 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 ORC4O43929 436 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 ZPR1O75312 459 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 PRLRP16471 622 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 CCND1P24385 295 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 TAF11Q15544 211 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 MB21D1Q8N884 522 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 NOVA2Q9UNW9 492 aaKnown RBP14.64□□□□□ -0.07
IFT88-202ENST00000351808 CEP131Q9UPN4 1083 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 AGAP1Q9UPQ3 857 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 MAPK8IP1Q9UQF2 711 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 M0R2C6 588 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 LUC7L3O95232 432 aaKnown RBP14.64□□□□□ -0.07
IFT88-202ENST00000351808 ALDH5A1P51649 535 aaPredicted RBP14.64□□□□□ -0.07
IFT88-202ENST00000351808 PDIA5Q14554 519 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 FAM81AQ8TBF8 368 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 MDM1Q8TC05 714 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 GORASP1Q9BQQ3 440 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 PAG1Q9NWQ8 432 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 IGSF1Q8N6C5 1336 aa14.64□□□□□ -0.07
IFT88-202ENST00000351808 IFIT3O14879 490 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 ALADP13716 330 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 TUBP50607 506 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 NUGGCQ68CJ6 796 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 ZNHIT6Q9NWK9 470 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 CFAP73A6NFT4 308 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 RASSF10A6NK89 507 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 GSTA1P08263 222 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 NQO1P15559 274 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 HSD17B3P37058 310 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 MEA1Q16626 185 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 MICU3Q86XE3 530 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 WHAMMQ8TF30 809 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 NAF1Q96HR8 494 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 BLZF1Q9H2G9 400 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 PLCB1Q9NQ66 1216 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 DENND2AQ9ULE3 1009 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 C2CD2Q9Y426 696 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 SRPRBQ9Y5M8 271 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 EID1Q9Y6B2 187 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 LRRD1A4D1F6 860 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 ECEL1O95672 775 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
IFT88-202ENST00000351808 KIF5BP33176 963 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 HSPA9P38646 679 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 IARSP41252 1262 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 DNA2P51530 1060 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 ZNF844Q08AG5 666 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 AIMP1Q12904 312 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 LINS1Q8NG48 757 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 CHMP6Q96FZ7 201 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 RBM41Q96IZ5 413 aaKnown RBP14.63□□□□□ -0.07
IFT88-202ENST00000351808 KCNJ14Q9UNX9 436 aa14.63□□□□□ -0.07
IFT88-202ENST00000351808 H0YGN5 161 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 PAEPP09466 180 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 MAGOHP61326 146 aaKnown RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 HLTFQ14527 1009 aaKnown RBP eCLIP14.62□□□□□ -0.07
IFT88-202ENST00000351808 NCAPG2Q86XI2 1143 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 ANKS4BQ8N8V4 417 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 ZNF579Q8NAF0 562 aaKnown RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 NCOA7Q8NI08 942 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 NELFBQ8WX92 580 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 MAGOHBQ96A72 148 aaKnown RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 KRT12Q99456 494 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 PICK1Q9NRD5 415 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 THRAP3Q9Y2W1 955 aaKnown RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 NFS1Q9Y697 457 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 CDKL5O76039 1030 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms