RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 PHLDB3Q6NSJ2 640 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 HAUS1Q96CS2 278 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 DBNDD1Q9H9R9 158 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 EPS15L1Q9UBC2 864 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 RAD17O75943 681 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 KRT80Q6KB66 452 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 ABHD8Q96I13 439 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 DACT1Q9NYF0 836 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 DAB2P98082 770 aa12.9□□□□□ -0.35
TRAF3-201ENST00000347662 IFT122Q9HBG6 1241 aa12.9□□□□□ -0.35
TRAF3-201ENST00000347662 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
TRAF3-201ENST00000347662 COG4Q9H9E3 785 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 H0YC42 278 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 GPC4O75487 556 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 TXKP42681 527 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 HAUS3Q68CZ6 603 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-201ENST00000347662 EVI5O60447 810 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 SERPINB2P05120 415 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 PIK3AP1Q6ZUJ8 805 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 PPHLN1Q8NEY8 458 aaKnown RBP12.89□□□□□ -0.35
TRAF3-201ENST00000347662 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 FLOT2Q14254 428 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 FBXL13Q8NEE6 735 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
TRAF3-201ENST00000347662 USP17L12C9JPN9 530 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 USP17L21D6R901 530 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 PHKBQ93100 1093 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 MAP3K7O43318 606 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 EXOC3O60645 756 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 GCKP35557 465 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 ARPP19P56211 112 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
TRAF3-201ENST00000347662 KRT10P13645 584 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
TRAF3-201ENST00000347662 BTN2A2Q8WVV5 523 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 NAPGQ99747 312 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-201ENST00000347662 TRPA1O75762 1119 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ANKRD20A4Q4UJ75 823 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ANKRD20A2Q5SQ80 823 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 FAM102BQ5T8I3 360 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ANKRD20A1Q5TYW2 823 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 PDZD4Q76G19 769 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-201ENST00000347662 GREM2Q9H772 168 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 RNF40O75150 1001 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ZBTB7AO95365 584 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 SKOR1P84550 965 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 TMED1Q13445 227 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 TTC1Q99614 292 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 MLXIPQ9HAP2 919 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ESRRBO95718 433 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 EVCP57679 992 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
TRAF3-201ENST00000347662 KHDRBS2Q5VWX1 349 aaKnown RBP12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ZFYVE1Q9HBF4 777 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
TRAF3-201ENST00000347662 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 EFCAB14O75071 495 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ASPHQ12797 758 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 RCN2Q14257 317 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 LONRF2Q1L5Z9 754 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 KIAA1841Q6NSI8 718 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 PEX26Q7Z412 305 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 KBTBD3Q8NAB2 608 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 TRIM4Q9C037 500 aa12.88□□□□□ -0.35
TRAF3-201ENST00000347662 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 PEX19P40855 299 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 IGBP1P78318 339 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 SNX1Q13596 522 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 SMAP1Q8IYB5 467 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-201ENST00000347662 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
TRAF3-201ENST00000347662 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
TRAF3-201ENST00000347662 Q3C1V9 767 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
TRAF3-201ENST00000347662 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 DEPTORQ8TB45 409 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 SLC8A2Q9UPR5 921 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 FRMD3A2A2Y4 597 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-201ENST00000347662 POLR2BP30876 1174 aaKnown RBP12.87□□□□□ -0.35
TRAF3-201ENST00000347662 CHRNDQ07001 517 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 PTK2BQ14289 1009 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
TRAF3-201ENST00000347662 GLE1Q53GS7 698 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms