RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 C9orf50Q5SZB4 431 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 MFSD5Q6N075 450 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 MFSD6Q6ZSS7 791 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 TMEM199Q8N511 208 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 AGBL1Q96MI9 1066 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 LTBP2Q14767 1821 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 ARVCFO00192 962 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 HIP1O00291 1037 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 ZNF213O14771 459 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
SGCA-202ENST00000344627 TOP1P11387 765 aaKnown RBP14.62□□□□□ -0.07
SGCA-202ENST00000344627 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
SGCA-202ENST00000344627 CCDC144BQ3MJ40 725 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 ARMCX2Q7L311 632 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 FAM133AQ8N9E0 248 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 CDX2Q99626 313 aaPredicted RBP14.62□□□□□ -0.07
SGCA-202ENST00000344627 MAF1Q9H063 256 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 MTIF3Q9H2K0 278 aaKnown RBP14.62□□□□□ -0.07
SGCA-202ENST00000344627 OSBPL3Q9H4L5 887 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 RNF146Q9NTX7 359 aa14.62□□□□□ -0.07
SGCA-202ENST00000344627 ASGR1P07306 291 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 SLC16A2P36021 539 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 NOVP48745 357 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 GNASQ5JWF2 1037 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 IQSEC1Q6DN90 963 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 PSRC1Q6PGN9 363 aaPredicted RBP14.61□□□□□ -0.07
SGCA-202ENST00000344627 SYMPKQ92797 1274 aaKnown RBP14.61□□□□□ -0.07
SGCA-202ENST00000344627 LENG1Q96BZ8 264 aaPredicted RBP14.61□□□□□ -0.07
SGCA-202ENST00000344627 TRERF1Q96PN7 1200 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
SGCA-202ENST00000344627 TBX21Q9UL17 535 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
SGCA-202ENST00000344627 FRMPD2Q68DX3 1309 aaPredicted RBP14.61□□□□□ -0.07
SGCA-202ENST00000344627 FGRP09769 529 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 CNTN2Q02246 1040 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 TTBK2Q6IQ55 1244 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 CCDC144CPQ8IYA2 1237 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 VTI1AQ96AJ9 217 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 MPHOSPH6Q99547 160 aaKnown RBP14.6□□□□□ -0.07
SGCA-202ENST00000344627 ADD3Q9UEY8 706 aaKnown RBP14.6□□□□□ -0.07
SGCA-202ENST00000344627 CCPG1Q9ULG6 757 aa14.6□□□□□ -0.07
SGCA-202ENST00000344627 SYDE2Q5VT97 1194 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 NOL8Q76FK4 1167 aaKnown RBP14.59□□□□□ -0.07
SGCA-202ENST00000344627 MAFAQ8NHW3 353 aaPredicted RBP14.59□□□□□ -0.07
SGCA-202ENST00000344627 ESR2Q92731 530 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 ZKSCAN3Q9BRR0 538 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 KATNBL1Q9H079 304 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 AP5M1Q9H0R1 490 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 A1CFQ9NQ94 594 aaKnown RBP14.59□□□□□ -0.07
SGCA-202ENST00000344627 TCP11L1Q9NUJ3 509 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 ZMYM6O95789 1325 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 A0A0C4DFX4 3053 aa14.59□□□□□ -0.07
SGCA-202ENST00000344627 FOSL2P15408 326 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 ITGB8P26012 769 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 MUM1L1Q5H9M0 696 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 NSMFQ6X4W1 530 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 FAM126BQ8IXS8 530 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 SLC43A3Q8NBI5 491 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 FGD4Q96M96 766 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 FAM161BQ96MY7 647 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 TTC14Q96N46 770 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 VTA1Q9NP79 307 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 ZNF536O15090 1300 aa14.58□□□□□ -0.08
SGCA-202ENST00000344627 B4DLN1 442 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 ICAM1P05362 532 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 MRPL12P52815 198 aaKnown RBP14.57□□□□□ -0.08
SGCA-202ENST00000344627 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
SGCA-202ENST00000344627 BTNL9Q6UXG8 535 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 IQCA1Q86XH1 822 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 MORC4Q8TE76 937 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 TTYH1Q9H313 450 aaPredicted RBP14.57□□□□□ -0.08
SGCA-202ENST00000344627 CTNNA3Q9UI47 895 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 GNEQ9Y223 722 aaKnown RBP14.57□□□□□ -0.08
SGCA-202ENST00000344627 NEDD4P46934 1319 aa14.57□□□□□ -0.08
SGCA-202ENST00000344627 SOWAHBA6NEL2 793 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 B4E1Z4 1266 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 KDM4AO75164 1064 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 CD4P01730 458 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 PFKMP08237 780 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 PDHBP11177 359 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 DNAJB2P25686 324 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 RAB30Q15771 203 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 FSCN1Q16658 493 aaKnown RBP14.56□□□□□ -0.08
SGCA-202ENST00000344627 BRDTQ58F21 947 aaPredicted RBP14.56□□□□□ -0.08
SGCA-202ENST00000344627 RASIP1Q5U651 963 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 TLK2Q86UE8 772 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 RPUSD2Q8IZ73 545 aaKnown RBP14.56□□□□□ -0.08
SGCA-202ENST00000344627 TIFAQ96CG3 184 aa14.56□□□□□ -0.08
SGCA-202ENST00000344627 COL25A1Q9BXS0 654 aaPredicted RBP14.56□□□□□ -0.08
SGCA-202ENST00000344627 RANBP17Q9H2T7 1088 aaKnown RBP14.56□□□□□ -0.08
SGCA-202ENST00000344627 CYP39A1Q9NYL5 469 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms