RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 CYLC1P35663 651 aaPredicted RBP25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 USP17L1Q7RTZ2 530 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 RETREG2Q8NC44 543 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 CNOT6LQ96LI5 555 aaKnown RBP25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 NHEJ1Q9H9Q4 299 aaPredicted RBP25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 MAGEF1Q9HAY2 307 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 KRT86O43790 486 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 CCNE1P24864 410 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 HSP90B2PQ58FF3 399 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 CABP7Q86V35 215 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 DZIP1Q86YF9 867 aaKnown RBP25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 EEF2KMTQ96G04 330 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 ACBD3Q9H3P7 528 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 VIPAS39Q9H9C1 493 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 MED4Q9NPJ6 270 aa25.86■■□□□ 1.73
NKX2-3-201ENST00000344586 EIF3CLB5ME19 914 aaKnown RBP25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 ZBED6P86452 979 aa25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 MIIPQ5JXC2 388 aa25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 ANKRD40Q6AI12 368 aa25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 TXNRD3Q86VQ6 643 aa25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 LINC00116Q8NCU8 138 aa25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 CAPZA3Q96KX2 299 aa25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 PURBQ96QR8 312 aaKnown RBP25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 EIF3CQ99613 913 aaKnown RBP25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 CWC15Q9P013 229 aaKnown RBP25.85■■□□□ 1.73
NKX2-3-201ENST00000344586 GTF2E1P29083 439 aaPredicted RBP25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 NT5C2P49902 561 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 CKAP4Q07065 602 aaKnown RBP25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 TBC1D8BQ0IIM8 1120 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 TBC1D9BQ66K14 1250 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 CCDC170Q8IYT3 715 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 TRIM9Q9C026 710 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 ANKRD2Q9GZV1 360 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 ZNHIT6Q9NWK9 470 aaKnown RBP25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 BICDL2A1A5D9 508 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 TARSL2A2RTX5 802 aaKnown RBP25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 AARSP49588 968 aaKnown RBP eCLIP25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 PDE4DQ08499 809 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 TXNRD1Q16881 649 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 CCDC178Q5BJE1 867 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 RPGRIP1Q96KN7 1286 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 AK8Q96MA6 479 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 NRAPQ86VF7 1730 aa25.84■■□□□ 1.73
NKX2-3-201ENST00000344586 IRS2Q9Y4H2 1338 aa25.83■■□□□ 1.73
NKX2-3-201ENST00000344586 PALM3A6NDB9 673 aaPredicted RBP25.83■■□□□ 1.73
NKX2-3-201ENST00000344586 MCM3P25205 808 aa25.83■■□□□ 1.73
NKX2-3-201ENST00000344586 STK4Q13043 487 aa25.83■■□□□ 1.73
NKX2-3-201ENST00000344586 LEKR1Q6ZMV7 388 aa25.83■■□□□ 1.73
NKX2-3-201ENST00000344586 PHACTR2O75167 634 aa25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 OR52Z1P0C646 297 aa25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 FAM114A1Q8IWE2 563 aa25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 ZSCAN29Q8IWY8 852 aaPredicted RBP25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 SH3RF3Q8TEJ3 882 aaPredicted RBP25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 C7orf25Q9BPX7 421 aa25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 TCP11L1Q9NUJ3 509 aa25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 FEZ2Q9UHY8 353 aaPredicted RBP25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 THRAP3Q9Y2W1 955 aaKnown RBP25.83■■□□□ 1.72
NKX2-3-201ENST00000344586 ANO9A1A5B4 782 aa25.82■■□□□ 1.72
NKX2-3-201ENST00000344586 RPS6KA5O75582 802 aa25.82■■□□□ 1.72
NKX2-3-201ENST00000344586 MKNK2Q9HBH9 465 aa25.82■■□□□ 1.72
NKX2-3-201ENST00000344586 MTMR7Q9Y216 660 aa25.82■■□□□ 1.72
NKX2-3-201ENST00000344586 DUSP10Q9Y6W6 482 aa25.82■■□□□ 1.72
NKX2-3-201ENST00000344586 ZC3H4Q9UPT8 1303 aaKnown RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 A0A1W2PQJ5 194 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 NKRFO15226 690 aaKnown RBP eCLIP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 TSPY3P0CV98 308 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 TSPY8P0CW00 308 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 FCER1AP12319 257 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 MTIF2P46199 727 aaKnown RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 ASIC1P78348 528 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 CDK17Q00537 523 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 MAP9Q49MG5 647 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 FIGNQ5HY92 759 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 SMARCC1Q92922 1105 aaPredicted RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 NOC4LQ9BVI4 516 aaKnown RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 TSPYL1Q9H0U9 437 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 LCMT1Q9UIC8 334 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 HPCAL4Q9UM19 191 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 PDE2AO00408 941 aaPredicted RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 ZNF185O15231 689 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 KCNQ2O43526 872 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 IPO7O95373 1038 aaKnown RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 SYF2O95926 243 aaKnown RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 SPTY2D1Q68D10 685 aaPredicted RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 SLC44A5Q8NCS7 719 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 CCDC47Q96A33 483 aaKnown RBP25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 ERGIC2Q96RQ1 377 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 TMEM47Q9BQJ4 181 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 ZMYND12Q9H0C1 365 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 NAV1Q8NEY1 1877 aa25.81■■□□□ 1.72
NKX2-3-201ENST00000344586 GOLGA8HP0CJ92 632 aa25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 TNNT3P45378 269 aaPredicted RBP25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 CYP27A1Q02318 531 aa25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 SLC20A2Q08357 652 aa25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 SMIM5Q71RC9 77 aa25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 PCMTD1Q96MG8 357 aaPredicted RBP25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 FAM204AQ9H8W3 233 aa25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 ZNF831Q5JPB2 1677 aa25.8■■□□□ 1.72
NKX2-3-201ENST00000344586 ZNF263O14978 683 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 RNF40O75150 1001 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms