RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TSC1Q92574 1164 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 ZBTB9Q96C00 473 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 IWS1Q96ST2 819 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 CRNKL1Q9BZJ0 848 aaKnown RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 ABHD14A-ACY1A0A1B0GW23 586 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 RARBP10826 455 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 FCER1AP12319 257 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 SDHBP21912 280 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 ERVK-21P61565 698 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 ZKSCAN4Q969J2 545 aaPredicted RBP8.54□□□□□ -1.04
ZNF540-202ENST00000343599 MYCBPQ99417 103 aaPredicted RBP8.54□□□□□ -1.04
ZNF540-202ENST00000343599 SPC25Q9HBM1 224 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
ZNF540-202ENST00000343599 GUCY1A2P33402 732 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 SHMT1P34896 483 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 MAP3K12Q12852 859 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 NBPF20Q3BBV1 942 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 ZNF384Q8TF68 577 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 TINF2Q9BSI4 451 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 PATJQ8NI35 1801 aa8.54□□□□□ -1.04
ZNF540-202ENST00000343599 KIF26AQ9ULI4 1882 aaPredicted RBP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 CTIFO43310 598 aaKnown RBP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 ATP5JP18859 108 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 CTR9Q6PD62 1173 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 DNAJC18Q9H819 358 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 DDX4Q9NQI0 724 aaKnown RBP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 FOXD2O60548 495 aaPredicted RBP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 BMP1P13497 986 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 RBM5P52756 815 aaKnown RBP eCLIP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 TMEM240Q5SV17 173 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 TREML2Q5T2D2 321 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 GADL1Q6ZQY3 521 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 AMOTL1Q8IY63 956 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 TEX11Q8IYF3 940 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 C7orf61Q8IZ16 206 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 TTC14Q96N46 770 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 PPME1Q9Y570 386 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 MORC2Q9Y6X9 1032 aaPredicted RBP8.53□□□□□ -1.04
ZNF540-202ENST00000343599 TTC41PQ6P2S7 1318 aa8.53□□□□□ -1.04
ZNF540-202ENST00000343599 ORC4O43929 436 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 VCAM1P19320 739 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 TNNI3KQ59H18 835 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 MCTP2Q6DN12 878 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 NAA16Q6N069 864 aaPredicted RBP8.52□□□□□ -1.04
ZNF540-202ENST00000343599 SMC5Q8IY18 1101 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 FAM133AQ8N9E0 248 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 MXD3Q9BW11 206 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 PLSCR2Q9NRY7 297 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 FPGT-TNNI3KV9GXZ4 949 aa8.52□□□□□ -1.04
ZNF540-202ENST00000343599 ABCB11O95342 1321 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 A0A1W2PQ45 241 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-202ENST00000343599 A0A1W2PQY0 241 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 RIOK3O14730 519 aaKnown RBP8.52□□□□□ -1.05
ZNF540-202ENST00000343599 SYCP1Q15431 976 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 BANK1Q8NDB2 785 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 TRPV1Q8NER1 839 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 P2RX5Q93086 422 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 KATNAL1Q9BW62 490 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 PRR12Q9ULL5 1215 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 LZTS1Q9Y250 596 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 WTIPA6NIX2 430 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-202ENST00000343599 CTAGE5O15320 804 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 BFSP2Q13515 415 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 ABCB5Q2M3G0 1257 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 LRRC24Q50LG9 513 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 ODR4Q5SWX8 454 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 GPR161Q8N6U8 529 aaKnown RBP8.52□□□□□ -1.05
ZNF540-202ENST00000343599 PIBF1Q8WXW3 757 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 TEX13BQ9BXU2 312 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.52□□□□□ -1.05
ZNF540-202ENST00000343599 SLC38A10Q9HBR0 1119 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 SPTLC3Q9NUV7 552 aa8.52□□□□□ -1.05
ZNF540-202ENST00000343599 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
ZNF540-202ENST00000343599 NBPF7P0C2Y1 421 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-202ENST00000343599 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
ZNF540-202ENST00000343599 HERC4Q5GLZ8 1057 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-202ENST00000343599 MAMSTRQ6ZN01 415 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 HDAC7Q8WUI4 952 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 TIFAQ96CG3 184 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 BRMS1Q9HCU9 246 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 SNRKQ9NRH2 765 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 TAF5LO75529 589 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 PTPN5P54829 565 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 FAAP100Q0VG06 881 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 CT47A1Q5JQC4 288 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-202ENST00000343599 C12orf60Q5U649 245 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 USP38Q8NB14 1042 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 NEK9Q8TD19 979 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 MOV10L1Q9BXT6 1211 aaKnown RBP8.51□□□□□ -1.05
ZNF540-202ENST00000343599 FANCMQ8IYD8 2048 aa8.51□□□□□ -1.05
ZNF540-202ENST00000343599 HAS3O00219 553 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 CYP2E1P05181 493 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms