RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 KIFC2Q96AC6 838 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 ZSCAN31Q96LW9 406 aaPredicted RBP21.72■■□□□ 1.07
CDHR4-201ENST00000343366 GPCPD1Q9NPB8 672 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 BRPF3Q9ULD4 1205 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 NAP1L2Q9ULW6 460 aaPredicted RBP21.72■■□□□ 1.07
CDHR4-201ENST00000343366 FRMPD2Q68DX3 1309 aaPredicted RBP21.72■■□□□ 1.07
CDHR4-201ENST00000343366 A0A0G2JMZ2 1700 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 MUC3AQ02505 3323 aa21.71■■□□□ 1.07
CDHR4-201ENST00000343366 CPLX2Q6PUV4 134 aaKnown RBP21.71■■□□□ 1.07
CDHR4-201ENST00000343366 GPRC5AQ8NFJ5 357 aa21.71■■□□□ 1.07
CDHR4-201ENST00000343366 SPZ1Q9BXG8 430 aa21.71■■□□□ 1.07
CDHR4-201ENST00000343366 LIMCH1Q9UPQ0 1083 aa21.71■■□□□ 1.07
CDHR4-201ENST00000343366 POTEB2H3BUK9 544 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 XRCC5P13010 732 aaKnown RBP21.7■■□□□ 1.06
CDHR4-201ENST00000343366 PDIA3P30101 505 aaKnown RBP21.7■■□□□ 1.06
CDHR4-201ENST00000343366 USP6NLQ92738 828 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 MYL10Q9BUA6 226 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 RIOX1Q9H6W3 641 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 SLC38A10Q9HBR0 1119 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 FBXO28Q9NVF7 368 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 PRR12Q9ULL5 1215 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 LTBP2Q14767 1821 aa21.7■■□□□ 1.06
CDHR4-201ENST00000343366 SLC25A27O95847 323 aa21.69■■□□□ 1.06
CDHR4-201ENST00000343366 GOLGA8HP0CJ92 632 aa21.69■■□□□ 1.06
CDHR4-201ENST00000343366 LHX8Q68G74 356 aa21.69■■□□□ 1.06
CDHR4-201ENST00000343366 FAM109BQ6ICB4 259 aaPredicted RBP21.69■■□□□ 1.06
CDHR4-201ENST00000343366 ATG4CQ96DT6 458 aa21.69■■□□□ 1.06
CDHR4-201ENST00000343366 UBE2OQ9C0C9 1292 aaKnown RBP21.69■■□□□ 1.06
CDHR4-201ENST00000343366 SLKQ9H2G2 1235 aaPredicted RBP21.69■■□□□ 1.06
CDHR4-201ENST00000343366 RANBP17Q9H2T7 1088 aaKnown RBP21.69■■□□□ 1.06
CDHR4-201ENST00000343366 SH2B1Q9NRF2 756 aaPredicted RBP21.69■■□□□ 1.06
CDHR4-201ENST00000343366 PRKAR2AP13861 404 aaKnown RBP21.68■■□□□ 1.06
CDHR4-201ENST00000343366 ERVK-9P63128 1117 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 ERVK-24P63145 666 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 TTBK2Q6IQ55 1244 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 ADGRF4Q8IZF3 695 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 STAG2Q8N3U4 1231 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 GUCD1Q96NT3 240 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 RBPJLQ9UBG7 517 aa21.68■■□□□ 1.06
CDHR4-201ENST00000343366 COL11A1P12107 1806 aaPredicted RBP21.67■■□□□ 1.06
CDHR4-201ENST00000343366 PFKFB2O60825 505 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 CDKL5O76039 1030 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 SLC16A2P36021 539 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 LRRC26Q2I0M4 334 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 TKFCQ3LXA3 575 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 POTEEQ6S8J3 1075 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 SAMD1Q6SPF0 538 aaPredicted RBP21.67■■□□□ 1.06
CDHR4-201ENST00000343366 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 CCAR1Q8IX12 1150 aaKnown RBP21.67■■□□□ 1.06
CDHR4-201ENST00000343366 SHCBP1Q8NEM2 672 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 TEX13BQ9BXU2 312 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 MAF1Q9H063 256 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 TXNRD2Q9NNW7 524 aa21.67■■□□□ 1.06
CDHR4-201ENST00000343366 CPLX1O14810 134 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 PEX10O60683 326 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 STAT3P40763 770 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 RASGRP2Q7LDG7 609 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.66■■□□□ 1.06
CDHR4-201ENST00000343366 MTMR8Q96EF0 704 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 RRP36Q96EU6 259 aaKnown RBP21.66■■□□□ 1.06
CDHR4-201ENST00000343366 PAGR1Q9BTK6 254 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 SPATC1LQ9H0A9 340 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 SEC63Q9UGP8 760 aaKnown RBP21.66■■□□□ 1.06
CDHR4-201ENST00000343366 TPCN1Q9ULQ1 816 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 MYH6P13533 1939 aa21.66■■□□□ 1.06
CDHR4-201ENST00000343366 ZBTB5O15062 677 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 ICAM1P05362 532 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 RXRAP19793 462 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 CYP2B6P20813 491 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 MAPK4P31152 587 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 CACNB2Q08289 660 aaPredicted RBP21.65■■□□□ 1.06
CDHR4-201ENST00000343366 RIOX2Q8IUF8 465 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 REPS2Q8NFH8 660 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 SOCS4Q8WXH5 440 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 MROH8Q9H579 483 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 JMJD4Q9H9V9 463 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 FBXO40Q9UH90 709 aa21.65■■□□□ 1.06
CDHR4-201ENST00000343366 ZNF214Q9UL59 606 aaPredicted RBP21.65■■□□□ 1.06
CDHR4-201ENST00000343366 PNMA6FA0A0J9YX94 578 aa21.64■■□□□ 1.05
CDHR4-201ENST00000343366 TMEM132BQ14DG7 1078 aa21.64■■□□□ 1.05
CDHR4-201ENST00000343366 CDC37Q16543 378 aaPredicted RBP21.64■■□□□ 1.05
CDHR4-201ENST00000343366 BTBD7Q9P203 1132 aa21.64■■□□□ 1.05
CDHR4-201ENST00000343366 TTC28Q96AY4 2481 aa21.64■■□□□ 1.05
CDHR4-201ENST00000343366 hCG_1984214I3L0E3 225 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 STRNO43815 780 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 CNMDO75829 334 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 IFNAR1P17181 557 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 CDC27P30260 824 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 AKAP17AQ02040 695 aaKnown RBP21.63■■□□□ 1.05
CDHR4-201ENST00000343366 PLS1Q14651 629 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 MORN1Q5T089 497 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 TRIM22Q8IYM9 498 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 SRBD1Q8N5C6 995 aaKnown RBP21.63■■□□□ 1.05
CDHR4-201ENST00000343366 ZNF713Q8N859 430 aaPredicted RBP21.63■■□□□ 1.05
CDHR4-201ENST00000343366 CHST13Q8NET6 341 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 NUDT12Q9BQG2 462 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 AMNQ9BXJ7 453 aa21.63■■□□□ 1.05
CDHR4-201ENST00000343366 RNF26Q9BY78 433 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms