RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 SPAG7O75391 227 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 SCYL2Q6P3W7 929 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 SCG3Q8WXD2 468 aaKnown RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 CARD6Q9BX69 1037 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 MYH6P13533 1939 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 NCOA2Q15596 1464 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 VGLL3A8MV65 326 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 MAGEA1P43355 309 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 DEPDC1Q5TB30 811 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 DCTN3O75935 186 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 KDM4CQ9H3R0 1056 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 ATP5HO75947 161 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 FMNL1O95466 1100 aaPredicted RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 OLFM3Q96PB7 478 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 GEMIN8Q9NWZ8 242 aaKnown RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 DCDC2Q9UHG0 476 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 ZFYVE19Q96K21 471 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 HNRNPRO43390 633 aaKnown RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 WDR47O94967 919 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 ATP1A2P50993 1020 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 THOC5Q13769 683 aaKnown RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 TAGAPQ8N103 731 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 SNX21Q969T3 373 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 KCNH3Q9ULD8 1083 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 LZTS3O60299 673 aaPredicted RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 NOSTRINQ8IVI9 506 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 RYBPQ8N488 228 aaPredicted RBP19.13■□□□□ 0.65
SMAD4-201ENST00000342988 SH3GL2Q99962 352 aa19.13■□□□□ 0.65
SMAD4-201ENST00000342988 ARHGEF37A1IGU5 675 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 RARSP54136 660 aaKnown RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 C1orf228Q6PIY5 440 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 TTC6Q86TZ1 520 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 SNRKQ9NRH2 765 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 MAPK13O15264 365 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 S100A5P33763 92 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 IL15P40933 162 aaPredicted RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 USP26Q9BXU7 913 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 PTPDC1A2A3K4 754 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 CUTAO60888 179 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 DNAJC17Q9NVM6 304 aaKnown RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 YWHAHQ04917 246 aaPredicted RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 ZC3H18Q86VM9 953 aaKnown RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 PSMB7Q99436 277 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 SNRPA1P09661 255 aaKnown RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 TAC1P20366 129 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 C19orf60Q96EN9 201 aa19.12■□□□□ 0.65
SMAD4-201ENST00000342988 DHX32Q7L7V1 743 aaKnown RBP19.12■□□□□ 0.65
SMAD4-201ENST00000342988 WDR64B1ANS9 1081 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 NELFBQ8WX92 580 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 TMEM245Q9H330 911 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 KIF14Q15058 1648 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 YWHAGP61981 247 aaKnown RBP eCLIP19.11■□□□□ 0.65
SMAD4-201ENST00000342988 MCUQ8NE86 351 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 MSH2P43246 934 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 POSTNQ15063 836 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 TYW1BQ6NUM6 668 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 METTL13Q8N6R0 699 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 PLIN2Q99541 437 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 MMEP08473 750 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 HNRNPCP07910 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
SMAD4-201ENST00000342988 IFT88Q13099 833 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 GRAMD1BQ3KR37 738 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 ALS2CLQ60I27 953 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 ZBTB8OSQ8IWT0 167 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 MMS19Q96T76 1030 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 GCNAQ96QF7 691 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 PCDHB13Q9Y5F0 798 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 CCDC61Q9Y6R9 512 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 MAST3O60307 1309 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 IGSF3O75054 1194 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 BRD1O95696 1058 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 PPP2R5BQ15173 497 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 NLRP4Q96MN2 994 aa19.11■□□□□ 0.65
SMAD4-201ENST00000342988 CAB39Q9Y376 341 aaPredicted RBP19.11■□□□□ 0.65
SMAD4-201ENST00000342988 POLD1P28340 1107 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 LIG3P49916 1009 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 PPHLN1Q8NEY8 458 aaKnown RBP19.1■□□□□ 0.65
SMAD4-201ENST00000342988 PARVBQ9HBI1 364 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 MECOMQ03112 1051 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 FSCBQ5H9T9 825 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 TEKT4Q8WW24 435 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 AARS2Q5JTZ9 985 aaKnown RBP19.1■□□□□ 0.65
SMAD4-201ENST00000342988 CEP55Q53EZ4 464 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 NCAPG2Q86XI2 1143 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 MMS22LQ6ZRQ5 1243 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 TRIM67Q6ZTA4 783 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 LUZP2Q86TE4 346 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 ICA1LQ8NDH6 482 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 LRRC2Q9BYS8 371 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 DEAF1O75398 565 aaPredicted RBP19.1■□□□□ 0.65
SMAD4-201ENST00000342988 HERC4Q5GLZ8 1057 aaPredicted RBP19.1■□□□□ 0.65
SMAD4-201ENST00000342988 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 NBPF10Q6P3W6 841 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms