RNA–Protein interactions for RNA: ENST00000342222.6

IKBKB-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-201ENST00000342222 LRRC41Q15345 812 aa13.5□□□□□ -0.25
IKBKB-201ENST00000342222 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
IKBKB-201ENST00000342222 CDKAL1Q5VV42 579 aa13.5□□□□□ -0.25
IKBKB-201ENST00000342222 TEX11Q8IYF3 940 aa13.5□□□□□ -0.25
IKBKB-201ENST00000342222 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
IKBKB-201ENST00000342222 MST1RQ04912 1400 aa13.5□□□□□ -0.25
IKBKB-201ENST00000342222 SLIT3O75094 1523 aa13.5□□□□□ -0.25
IKBKB-201ENST00000342222 EBAG9O00559 213 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 TPTE2Q6XPS3 522 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 REXO1Q8N1G1 1221 aaKnown RBP13.49□□□□□ -0.25
IKBKB-201ENST00000342222 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 MED15Q96RN5 788 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 MINPP1Q9UNW1 487 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
IKBKB-201ENST00000342222 FAM84BQ96KN1 310 aaPredicted RBP13.49□□□□□ -0.25
IKBKB-201ENST00000342222 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 TSGA10Q9BZW7 698 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 MOCS3O95396 460 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 KLK7P49862 253 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 EVX2Q03828 476 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 USP17L2Q6R6M4 530 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 KRT25Q7Z3Z0 450 aa13.49□□□□□ -0.25
IKBKB-201ENST00000342222 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
IKBKB-201ENST00000342222 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
IKBKB-201ENST00000342222 GNPATO15228 680 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 ARL6IP4Q66PJ3 421 aaKnown RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 ANKRD2Q9GZV1 360 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 TMEM60Q9H2L4 133 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 FCER1AP12319 257 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 CALCRLQ16602 461 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 TRIM58Q8NG06 486 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 OPA1O60313 960 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 PCP11498 1178 aaKnown RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 CCNE1P24864 410 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 GSTO1P78417 241 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 ZBED6P86452 979 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 NEK8Q86SG6 692 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 EYA3Q99504 573 aa13.48□□□□□ -0.25
IKBKB-201ENST00000342222 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
IKBKB-201ENST00000342222 ATP1A2P50993 1020 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 KCTD16Q68DU8 428 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 MLXIPQ9HAP2 919 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 KLRK1P26718 216 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 EIF4A3P38919 411 aaKnown RBP13.47□□□□□ -0.25
IKBKB-201ENST00000342222 GUCY2FP51841 1108 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 RASSF7Q02833 373 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
IKBKB-201ENST00000342222 CFAP58Q5T655 872 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
IKBKB-201ENST00000342222 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 ZNF335Q9H4Z2 1342 aaPredicted RBP13.47□□□□□ -0.25
IKBKB-201ENST00000342222 RNF225M0QZC1 329 aaPredicted RBP13.47□□□□□ -0.25
IKBKB-201ENST00000342222 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 TBCKQ8TEA7 893 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 THAP9Q9H5L6 903 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 L1RE1Q9UN81 338 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 DUSP10Q9Y6W6 482 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 CCT5P48643 541 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 KLHL7Q8IXQ5 586 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 DHTKD1Q96HY7 919 aaPredicted RBP13.47□□□□□ -0.25
IKBKB-201ENST00000342222 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 C5P01031 1676 aa13.47□□□□□ -0.25
IKBKB-201ENST00000342222 RGPD5Q99666 1765 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 ITIH6Q6UXX5 1313 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 CCDC84Q86UT8 332 aaPredicted RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 NDUFAB1O14561 156 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 GGCXP38435 758 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 PMS1P54277 932 aaKnown RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 USP14P54578 494 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 LRRC47Q8N1G4 583 aaKnown RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 NSUN4Q96CB9 384 aaKnown RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.25
IKBKB-201ENST00000342222 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
IKBKB-201ENST00000342222 GNGT1P63211 74 aa13.46□□□□□ -0.26
IKBKB-201ENST00000342222 NYXQ9GZU5 481 aa13.46□□□□□ -0.26
IKBKB-201ENST00000342222 POLD4Q9HCU8 107 aa13.46□□□□□ -0.26
IKBKB-201ENST00000342222 SMARCAL1Q9NZC9 954 aa13.46□□□□□ -0.26
IKBKB-201ENST00000342222 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.26
IKBKB-201ENST00000342222 LRRIQ3A6PVS8 624 aaPredicted RBP13.45□□□□□ -0.26
IKBKB-201ENST00000342222 RFC4P35249 363 aa13.45□□□□□ -0.26
IKBKB-201ENST00000342222 RBM5P52756 815 aaKnown RBP eCLIP13.45□□□□□ -0.26
IKBKB-201ENST00000342222 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
IKBKB-201ENST00000342222 STK4Q13043 487 aa13.45□□□□□ -0.26
IKBKB-201ENST00000342222 HERC4Q5GLZ8 1057 aaPredicted RBP13.45□□□□□ -0.26
IKBKB-201ENST00000342222 ANKRD40Q6AI12 368 aa13.45□□□□□ -0.26
IKBKB-201ENST00000342222 ZNF804AQ7Z570 1209 aa13.45□□□□□ -0.26
IKBKB-201ENST00000342222 LACRTQ9GZZ8 138 aa13.45□□□□□ -0.26
IKBKB-201ENST00000342222 FAM205AQ6ZU69 1335 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms