RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 HOXA13P31271 388 aaPredicted RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 EHHADHQ08426 723 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 NKX1-1Q15270 411 aaPredicted RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 KCTD16Q68DU8 428 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 CCDC84Q86UT8 332 aaPredicted RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 TMEM47Q9BQJ4 181 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 XDHP47989 1333 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 TNFAIP3P21580 790 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 ADAM9Q13443 819 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 TBC1D22AQ8WUA7 517 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 PXDNQ92626 1479 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 USP17L5A8MUK1 530 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 H0YIN7 160 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 SPOPO43791 374 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 MNAT1P51948 309 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 ITPK1Q13572 414 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 DAAM2Q86T65 1068 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
CDH5-201ENST00000341529 CCDC127Q96BQ5 260 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 CDC23Q9UJX2 597 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 AGLP35573 1532 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 DLC1Q96QB1 1528 aa13.25□□□□□ -0.29
CDH5-201ENST00000341529 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 KCNK3O14649 394 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 SARM1Q6SZW1 724 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
CDH5-201ENST00000341529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDH5-201ENST00000341529 LARP4BQ92615 738 aaKnown RBP13.24□□□□□ -0.29
CDH5-201ENST00000341529 WDR24Q96S15 920 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 EBAG9O00559 213 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 PRCPP42785 496 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 VPS41P49754 854 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 TRIM28Q13263 835 aaKnown RBP13.24□□□□□ -0.29
CDH5-201ENST00000341529 LONRF2Q1L5Z9 754 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
CDH5-201ENST00000341529 NUP58Q9BVL2 599 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 STK32BQ9NY57 414 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 OPA1O60313 960 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 ALAS1P13196 640 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 P2RX5Q93086 422 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 SYNCQ9H7C4 482 aa13.24□□□□□ -0.29
CDH5-201ENST00000341529 ARMCX3Q9UH62 379 aaPredicted RBP13.24□□□□□ -0.29
CDH5-201ENST00000341529 GAS7O60861 476 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 HSPA1LP34931 641 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 TNNC1P63316 161 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 SLC7A5Q01650 507 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 MIGA2Q7L4E1 593 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
CDH5-201ENST00000341529 NDUFAB1O14561 156 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 FTCDO95954 541 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 GSTA5Q7RTV2 222 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 DPH5Q9H2P9 285 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 RAD17O75943 681 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 PEX26Q7Z412 305 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
CDH5-201ENST00000341529 MMP10P09238 476 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 XRCC5P13010 732 aaKnown RBP13.22□□□□□ -0.29
CDH5-201ENST00000341529 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 RPS6KA1Q15418 735 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 ZNF658Q5TYW1 1059 aaPredicted RBP13.22□□□□□ -0.29
CDH5-201ENST00000341529 SRGAP1Q7Z6B7 1085 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 HAUS4Q9H6D7 363 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 HDAC6Q9UBN7 1215 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 SCAF8Q9UPN6 1271 aaKnown RBP13.22□□□□□ -0.29
CDH5-201ENST00000341529 VGLL3A8MV65 326 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 CSF1RP07333 972 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
CDH5-201ENST00000341529 GABPB1Q06547 395 aaPredicted RBP13.22□□□□□ -0.29
CDH5-201ENST00000341529 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms