RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 USP46P62068 366 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 CRHR2Q13324 411 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 NBPF9Q3BBW0 867 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 CCDC178Q5BJE1 867 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 SLC9C2Q5TAH2 1124 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 DCAF15Q66K64 600 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 CTR9Q6PD62 1173 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 MAGEB6Q8N7X4 407 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 GMCL1P1Q8NEA9 526 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 UBE2Q2Q8WVN8 375 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 CCDC17Q96LX7 622 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 MXD3Q9BW11 206 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 ZNF341Q9BYN7 854 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 PI4KBQ9UBF8 816 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 HCN4Q9Y3Q4 1203 aa4.15□□□□□ -1.74
CCDC66-202ENST00000341455 PROB1E7EW31 1015 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 PIK3CDO00329 1044 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 GPAA1O43292 621 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 SNHG28P0DPA3 235 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 CCL5P13501 91 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 CYP7A1P22680 504 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 SMARCA1P28370 1054 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 SHMT1P34896 483 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 PPATQ06203 517 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 NMIQ13287 307 aaPredicted RBP4.15□□□□□ -1.75
CCDC66-202ENST00000341455 CRTC2Q53ET0 693 aaPredicted RBP4.15□□□□□ -1.75
CCDC66-202ENST00000341455 GORABQ5T7V8 394 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 DEFB123Q8N688 67 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 CD99L2Q8TCZ2 262 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 HPS1Q92902 700 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 CCDC136Q96JN2 1154 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 BACH2Q9BYV9 841 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 DEFB129Q9H1M3 183 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 BOLA2Q9H3K6 86 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 LMCD1Q9NZU5 365 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 ADAMTS5Q9UNA0 930 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 SNCAIPQ9Y6H5 919 aa4.15□□□□□ -1.75
CCDC66-202ENST00000341455 A0A0G2JLL6 359 aaPredicted RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 CXCL11O14625 94 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 SIAH2O43255 324 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 HSPD1P10809 573 aaKnown RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 GUCY1A2P33402 732 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 HSPA4P34932 840 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 RGS3P49796 1198 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 PUS10Q3MIT2 529 aaKnown RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 C8orf34Q49A92 452 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 ANGEL2Q5VTE6 544 aaKnown RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 NECAB2Q7Z6G3 386 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 PRRT2Q7Z6L0 340 aaPredicted RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 TTC6Q86TZ1 520 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 KIAA0825Q8IV33 1275 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 IFNL3Q8IZI9 196 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 ZNF592Q92610 1267 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 USP40Q9NVE5 1235 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 NYAP2Q9P242 653 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 LRP2BPQ9P2M1 347 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 MBD4O95243 580 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 COL19A1Q14993 1142 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 USP17L2Q6R6M4 530 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 TRIM46Q7Z4K8 759 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 SCYL3Q8IZE3 742 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 CLP1Q92989 425 aaKnown RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 TTC14Q96N46 770 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 DNAJC2Q99543 621 aaKnown RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 IL25Q9H293 177 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 CTNNA3Q9UI47 895 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 BRPF3Q9ULD4 1205 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 AFG3L2Q9Y4W6 797 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 TACC3Q9Y6A5 838 aa4.14□□□□□ -1.75
CCDC66-202ENST00000341455 ASTN2O75129 1339 aaPredicted RBP4.14□□□□□ -1.75
CCDC66-202ENST00000341455 DDTLA6NHG4 134 aaPredicted RBP4.13□□□□□ -1.75
CCDC66-202ENST00000341455 FAM196BA6NMK8 535 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 DDX11L8A8MPP1 907 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 PRR33A8MZF0 331 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 ATP2A1O14983 1001 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 HOXA7P31268 230 aaPredicted RBP4.13□□□□□ -1.75
CCDC66-202ENST00000341455 CAP2P40123 477 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 CAP1Q01518 475 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 NFIAQ12857 509 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 RASA3Q14644 834 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 BTNL9Q6UXG8 535 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 ZNF589Q86UQ0 364 aaPredicted RBP4.13□□□□□ -1.75
CCDC66-202ENST00000341455 TEX11Q8IYF3 940 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 SAMD3Q8N6K7 520 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 NEDD1Q8NHV4 660 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 MAFAQ8NHW3 353 aaPredicted RBP4.13□□□□□ -1.75
CCDC66-202ENST00000341455 GMCL1Q96IK5 515 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 NOL10Q9BSC4 688 aaKnown RBP4.13□□□□□ -1.75
CCDC66-202ENST00000341455 FSD1Q9BTV5 496 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 KIAA1683Q9H0B3 1180 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 CNNM2Q9H8M5 875 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 TMOD2Q9NZR1 351 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 RAI14Q9P0K7 980 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 MORF4L1Q9UBU8 362 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 PALD1Q9ULE6 856 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 PCDHAC2Q9Y5I4 1007 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 RASA1P20936 1047 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 GRK4P32298 578 aa4.13□□□□□ -1.75
CCDC66-202ENST00000341455 FCGRTP55899 365 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms