RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 EDIL3O43854 480 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 NPR1P16066 1061 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 CASP14P31944 242 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 FXR1P51114 621 aaKnown RBP eCLIP22.62■■□□□ 1.21
SPG7-202ENST00000341316 COPB1P53618 953 aaKnown RBP22.62■■□□□ 1.21
SPG7-202ENST00000341316 KCNJ12Q14500 433 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 BMS1Q14692 1282 aaKnown RBP22.62■■□□□ 1.21
SPG7-202ENST00000341316 RAD9BQ6WBX8 426 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 REXO1Q8N1G1 1221 aaKnown RBP22.62■■□□□ 1.21
SPG7-202ENST00000341316 KCNQ5Q9NR82 932 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 N4BP3O15049 544 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 MFAP3LO75121 409 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 SHMT1P34896 483 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 TECP42680 631 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 CDC42EP5Q6NZY7 148 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 MNS1Q8NEH6 495 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 UBXN4Q92575 508 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 WDR24Q96S15 920 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 SERPINB13Q9UIV8 391 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 FHOD1Q9Y613 1164 aa22.62■■□□□ 1.21
SPG7-202ENST00000341316 ESYT2A0FGR8 921 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 RNF225M0QZC1 329 aaPredicted RBP22.61■■□□□ 1.21
SPG7-202ENST00000341316 KCNB1Q14721 858 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 APOBEC3HQ6NTF7 200 aaKnown RBP22.61■■□□□ 1.21
SPG7-202ENST00000341316 CREBRFQ8IUR6 639 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 AK8Q96MA6 479 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 MMTAG2Q9BU76 263 aaKnown RBP22.61■■□□□ 1.21
SPG7-202ENST00000341316 MRPL44Q9H9J2 332 aaKnown RBP22.61■■□□□ 1.21
SPG7-202ENST00000341316 PARP3Q9Y6F1 533 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 QSER1Q2KHR3 1735 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 NFIAQ12857 509 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 ASPRV1Q53RT3 343 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 NLGN1Q8N2Q7 840 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 CARD6Q9BX69 1037 aa22.61■■□□□ 1.21
SPG7-202ENST00000341316 A0A0U1RQJ8 604 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 TADA3O75528 432 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 RHOBTB3O94955 611 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 ZFPM1Q8IX07 1006 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 ATRIPQ8WXE1 791 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 AKT1S1Q96B36 256 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 ITIH6Q6UXX5 1313 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 TTBK2Q6IQ55 1244 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 GIMAP8Q8ND71 665 aaPredicted RBP22.6■■□□□ 1.21
SPG7-202ENST00000341316 SRRTQ9BXP5 876 aaKnown RBP22.6■■□□□ 1.21
SPG7-202ENST00000341316 PCDHAC2Q9Y5I4 1007 aa22.6■■□□□ 1.21
SPG7-202ENST00000341316 PPP1R11O60927 126 aaPredicted RBP22.59■■□□□ 1.21
SPG7-202ENST00000341316 TTLL1O95922 423 aa22.59■■□□□ 1.21
SPG7-202ENST00000341316 JMJD4Q9H9V9 463 aa22.59■■□□□ 1.21
SPG7-202ENST00000341316 NRXN2Q9P2S2 1712 aa22.59■■□□□ 1.21
SPG7-202ENST00000341316 MYL1P05976 194 aa22.59■■□□□ 1.21
SPG7-202ENST00000341316 SPAG1Q07617 926 aa22.59■■□□□ 1.21
SPG7-202ENST00000341316 ZNF543Q08ER8 600 aa22.59■■□□□ 1.21
SPG7-202ENST00000341316 H7C1D1 291 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 SLC37A4O43826 429 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 MMP10P09238 476 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 PNMA6AP0CW24 399 aaPredicted RBP22.58■■□□□ 1.21
SPG7-202ENST00000341316 COL11A2P13942 1736 aaPredicted RBP22.58■■□□□ 1.21
SPG7-202ENST00000341316 GNG11P61952 73 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 ADGRF4Q8IZF3 695 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 MTMR9Q96QG7 549 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 TRIM9Q9C026 710 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 DBNDD1Q9H9R9 158 aa22.58■■□□□ 1.21
SPG7-202ENST00000341316 GOLGA6L9A6NEM1 432 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 ALDH1B1P30837 517 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 TXKP42681 527 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 ADCY7P51828 1080 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 IRX2Q9BZI1 471 aaPredicted RBP22.57■■□□□ 1.2
SPG7-202ENST00000341316 CUEDC2Q9H467 287 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 SWAP70Q9UH65 585 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 ADGRG1Q9Y653 693 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 TDP2O95551 362 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 HHIPL2Q6UWX4 724 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 TEKT1Q969V4 418 aa22.57■■□□□ 1.2
SPG7-202ENST00000341316 NAA15Q9BXJ9 866 aaKnown RBP22.57■■□□□ 1.2
SPG7-202ENST00000341316 ARGLU1Q9NWB6 273 aaPredicted RBP22.57■■□□□ 1.2
SPG7-202ENST00000341316 EFCAB8A8MWE9 144 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 hCG_1984214I3L0E3 225 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 SLC16A2P36021 539 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 CACNB3P54284 484 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 SHROOM1Q2M3G4 852 aaPredicted RBP22.56■■□□□ 1.2
SPG7-202ENST00000341316 MSL1Q68DK7 614 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 TTI2Q6NXR4 508 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 ZNF713Q8N859 430 aaPredicted RBP22.56■■□□□ 1.2
SPG7-202ENST00000341316 KIFC2Q96AC6 838 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 DNAJC18Q9H819 358 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 ZRANB2O95218 330 aaKnown RBP eCLIP22.56■■□□□ 1.24e-6■■■■■ 39.6
SPG7-202ENST00000341316 CCDC175P0C221 793 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 FECHP22830 423 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 PDE6BP35913 854 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 TMCO3Q6UWJ1 677 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 CNGA4Q8IV77 575 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 MAGEF1Q9HAY2 307 aa22.56■■□□□ 1.2
SPG7-202ENST00000341316 G3V3G9 751 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 MPHOSPH10O00566 681 aaKnown RBP22.55■■□□□ 1.2
SPG7-202ENST00000341316 CASQ1P31415 396 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 ATP2B2Q01814 1243 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 STK4Q13043 487 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 UBE2SQ16763 222 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms