RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SMPD1P17405 629 aa19.64■□□□□ 0.73
NECTIN1-202ENST00000340882 SPRED2Q7Z698 418 aa19.64■□□□□ 0.73
NECTIN1-202ENST00000340882 RPUSD2Q8IZ73 545 aaKnown RBP19.64■□□□□ 0.73
NECTIN1-202ENST00000340882 CHST13Q8NET6 341 aa19.64■□□□□ 0.73
NECTIN1-202ENST00000340882 DYNC1LI2O43237 492 aaPredicted RBP19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 CABYRO75952 493 aa19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 TMEM67Q5HYA8 995 aa19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 PUS7LQ9H0K6 701 aaKnown RBP19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 CD320Q9NPF0 282 aa19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 CLIP2Q9UDT6 1046 aa19.63■□□□□ 0.73
NECTIN1-202ENST00000340882 IGKV6D-41A0A0C4DH26 115 aa19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 CYP2C9P11712 490 aa19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 DEFB128Q7Z7B8 93 aa19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 A1CFQ9NQ94 594 aaKnown RBP19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 TRMT13Q9NUP7 481 aaKnown RBP19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 FBXO40Q9UH90 709 aa19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 CTDP1Q9Y5B0 961 aaPredicted RBP19.62■□□□□ 0.73
NECTIN1-202ENST00000340882 TRIP12Q14669 1992 aaPredicted RBP19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 PIEZO1Q92508 2521 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 TANC1Q9C0D5 1861 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 GTPBP6O43824 516 aaPredicted RBP19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 TAP1Q03518 808 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 TAPT1Q6NXT6 567 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 EEPD1Q7L9B9 569 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 CLASRPQ8N2M8 674 aaKnown RBP19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 ARNTL2Q8WYA1 636 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 ALDH8A1Q9H2A2 487 aaPredicted RBP19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 COG5Q9UP83 839 aa19.61■□□□□ 0.73
NECTIN1-202ENST00000340882 ZNF536O15090 1300 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 RBAK-RBAKDNI3L0D1 243 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 GPR37L1O60883 481 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 IFIT2P09913 472 aaKnown RBP19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 UBE3CQ15386 1083 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 FBXO16Q8IX29 292 aaPredicted RBP19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 LRRC47Q8N1G4 583 aaKnown RBP19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 PPP1R13LQ8WUF5 828 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 AP5M1Q9H0R1 490 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 FEM1BQ9UK73 627 aa19.6■□□□□ 0.73
NECTIN1-202ENST00000340882 LPXNO60711 386 aa19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 OAZ1P54368 228 aa19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 ALYREFQ86V81 257 aaKnown RBP19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 HLA-CQ95604 372 aa19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 CEP95Q96GE4 821 aa19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 PURBQ96QR8 312 aaKnown RBP19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 ACAD9Q9H845 621 aa19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 ARPP21Q9UBL0 812 aaPredicted RBP19.59■□□□□ 0.73
NECTIN1-202ENST00000340882 SCN10AQ9Y5Y9 1956 aa19.58■□□□□ 0.73
NECTIN1-202ENST00000340882 ATP5JP18859 108 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 GRB10Q13322 594 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 SBK1Q52WX2 424 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 HSP90AB4PQ58FF6 505 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 MKL1Q969V6 931 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 CHMP4CQ96CF2 233 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 KIF1BPQ96EK5 621 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 HAUS7Q99871 368 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 MKNK2Q9HBH9 465 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 RNF146Q9NTX7 359 aa19.58■□□□□ 0.72
NECTIN1-202ENST00000340882 TNKSO95271 1327 aa19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 ASB14A6NK59 587 aa19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 GSG1L2A8MUP6 293 aa19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 MINDY4BA8MYZ0 360 aa19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 PRDM1O75626 825 aa19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 SNAP25P60880 206 aa19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 STRBPQ96SI9 672 aaKnown RBP19.57■□□□□ 0.72
NECTIN1-202ENST00000340882 PI4K2BG5E9Z4 385 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 ZEB2O60315 1214 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 PFKMP08237 780 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 MUM1L1Q5H9M0 696 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 IQSEC1Q6DN90 963 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 SEZ6LQ9BYH1 1024 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 MTMR4Q9NYA4 1195 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 COG6Q9Y2V7 657 aa19.56■□□□□ 0.72
NECTIN1-202ENST00000340882 TMEM232C9JQI7 657 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 BMP3P12645 472 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 SLFN13Q68D06 897 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 HERC6Q8IVU3 1022 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 GMCL1P1Q8NEA9 526 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 PANK1Q8TE04 598 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 TRERF1Q96PN7 1200 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 SLC9A7Q96T83 725 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 Q9Y3F1 56 aa19.55■□□□□ 0.72
NECTIN1-202ENST00000340882 LCHNA4D1U4 455 aa19.54■□□□□ 0.72
NECTIN1-202ENST00000340882 ALAS1P13196 640 aa19.54■□□□□ 0.72
NECTIN1-202ENST00000340882 PURAQ00577 322 aaKnown RBP19.54■□□□□ 0.72
NECTIN1-202ENST00000340882 KIAA1211Q6ZU35 1233 aa19.54■□□□□ 0.72
NECTIN1-202ENST00000340882 TMCO2Q7Z6W1 182 aaPredicted RBP19.54■□□□□ 0.72
NECTIN1-202ENST00000340882 EPB41L4AQ9HCS5 686 aaPredicted RBP19.54■□□□□ 0.72
NECTIN1-202ENST00000340882 IQCF3P0C7M6 154 aa19.53■□□□□ 0.72
NECTIN1-202ENST00000340882 RASGRP2Q7LDG7 609 aa19.53■□□□□ 0.72
NECTIN1-202ENST00000340882 PHOSPHO2Q8TCD6 241 aa19.53■□□□□ 0.72
NECTIN1-202ENST00000340882 CYP39A1Q9NYL5 469 aa19.53■□□□□ 0.72
NECTIN1-202ENST00000340882 WDFY4Q6ZS81 3184 aa19.53■□□□□ 0.72
NECTIN1-202ENST00000340882 TTLL1O95922 423 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 MYL3P08590 195 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 SUPT20HL2P0C7V6 817 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms