RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 NOX5Q96PH1 765 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 NUDT12Q9BQG2 462 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 ABCB11O95342 1321 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 NFX1Q12986 1120 aaKnown RBP14.27□□□□□ -0.12
LIN54-201ENST00000340417 MAP4K1Q92918 833 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 CEP170P1Q96L14 293 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 MTERF2Q49AM1 385 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 USP50Q70EL3 339 aaPredicted RBP14.27□□□□□ -0.12
LIN54-201ENST00000340417 STAG1Q8WVM7 1258 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.12
LIN54-201ENST00000340417 ALDH1A1P00352 501 aa14.27□□□□□ -0.13
LIN54-201ENST00000340417 CYP21A2P08686 494 aa14.27□□□□□ -0.13
LIN54-201ENST00000340417 IFI16Q16666 785 aaKnown RBP14.27□□□□□ -0.13
LIN54-201ENST00000340417 APOA5Q6Q788 366 aa14.27□□□□□ -0.13
LIN54-201ENST00000340417 CCDC155Q8N6L0 562 aa14.27□□□□□ -0.13
LIN54-201ENST00000340417 ZNF521Q96K83 1311 aa14.27□□□□□ -0.13
LIN54-201ENST00000340417 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
LIN54-201ENST00000340417 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
LIN54-201ENST00000340417 HOOK3Q86VS8 718 aa14.27□□□□□ -0.13
LIN54-201ENST00000340417 TDRD7Q8NHU6 1098 aaKnown RBP14.27□□□□□ -0.13
LIN54-201ENST00000340417 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
LIN54-201ENST00000340417 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
LIN54-201ENST00000340417 DDR1Q08345 913 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 CTR9Q6PD62 1173 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 TMEM47Q9BQJ4 181 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 GLIS2Q9BZE0 524 aaPredicted RBP14.26□□□□□ -0.13
LIN54-201ENST00000340417 VPS33BQ9H267 617 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 LARSQ9P2J5 1176 aaKnown RBP14.26□□□□□ -0.13
LIN54-201ENST00000340417 LRRC4BQ9NT99 713 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 PFKFB2O60825 505 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 C8orf34Q49A92 452 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 LPAR1Q92633 364 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 ZSCAN12O43309 604 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 AKR1B1P15121 316 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 CD19P15391 556 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 UBASH3AP57075 661 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 HSP90B2PQ58FF3 399 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 FLT1P17948 1338 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
LIN54-201ENST00000340417 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 KIF5CO60282 957 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 ATG9AQ7Z3C6 839 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
LIN54-201ENST00000340417 CTNND2Q9UQB3 1225 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 PPP2R3BQ9Y5P8 575 aa14.26□□□□□ -0.13
LIN54-201ENST00000340417 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
LIN54-201ENST00000340417 WDR46O15213 610 aaKnown RBP14.25□□□□□ -0.13
LIN54-201ENST00000340417 CAVIN2O95810 425 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
LIN54-201ENST00000340417 HDLBPQ00341 1268 aaKnown RBP14.25□□□□□ -0.13
LIN54-201ENST00000340417 FBXO33Q7Z6M2 555 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 FAM178BQ8IXR5 827 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 RDH13Q8NBN7 331 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 PSMD1Q99460 953 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 ZBTB5O15062 677 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 DTNBO60941 627 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 PDIA6Q15084 440 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 ME3Q16798 604 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 PLVAPQ9BX97 442 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 MAPK8IP1Q9UQF2 711 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 GSTTP1A0A1W2PQM5 241 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 SCYL3Q8IZE3 742 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 TBCKQ8TEA7 893 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 NACC1Q96RE7 527 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 SSX2IPQ9Y2D8 614 aa14.25□□□□□ -0.13
LIN54-201ENST00000340417 SH2B2O14492 632 aaPredicted RBP14.24□□□□□ -0.13
LIN54-201ENST00000340417 UBXN1Q04323 297 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 NEDD9Q14511 834 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
LIN54-201ENST00000340417 LSG1Q9H089 658 aaKnown RBP14.24□□□□□ -0.13
LIN54-201ENST00000340417 ZSWIM6Q9HCJ5 1215 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 ZBTB33Q86T24 672 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 FMNL3Q8IVF7 1028 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 YWHAEP62258 255 aaKnown RBP14.24□□□□□ -0.13
LIN54-201ENST00000340417 OR6J1Q8NGC5 347 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 TMEM110-MUSTN1A8MSY1 372 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 KRT9P35527 623 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 MTMR1Q13613 665 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 TMEM191BP0C7N4 346 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 DPF3Q92784 378 aa14.24□□□□□ -0.13
LIN54-201ENST00000340417 DENND3A2RUS2 1198 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 OSBPL3Q9H4L5 887 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 RARBP10826 455 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 SETQ01105 290 aaPredicted RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 METTL23Q86XA0 190 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 TEX13BQ9BXU2 312 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 USP25Q9UHP3 1055 aa14.23□□□□□ -0.13
LIN54-201ENST00000340417 MANSC4A6NHS7 340 aaPredicted RBP14.23□□□□□ -0.13
LIN54-201ENST00000340417 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms