RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 HDAC9Q9UKV0 1011 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 CYP4A11Q02928 519 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 DPYDQ12882 1025 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 PPFIBP1Q86W92 1011 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 CUL5Q93034 780 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 LZTS2Q9BRK4 669 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 DISC1Q9NRI5 854 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 EXOC1Q9NV70 894 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 CASZ1Q86V15 1759 aa11.46□□□□□ -0.58
RBFOX1-202ENST00000340209 KLRG2A4D1S0 409 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 JAG1P78504 1218 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 MCM6Q14566 821 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 NBPF9Q3BBW0 867 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 SPZ1Q9BXG8 430 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 LY75O60449 1722 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 TIAM2Q8IVF5 1701 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 MEIS1O00470 390 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 NAA30Q147X3 362 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 DDX39AO00148 427 aaKnown RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 PPP1R11O60927 126 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 MORC3Q14149 939 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 ENOX2Q16206 610 aaKnown RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 FAM83BQ5T0W9 1011 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 STYK1Q6J9G0 422 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 ZDHHC15Q96MV8 337 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 DDX25Q9UHL0 483 aaKnown RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 NDUFB10O96000 172 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 FCER1AP12319 257 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 SARM1Q6SZW1 724 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 CAMKK2Q96RR4 588 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 COL24A1Q17RW2 1714 aa11.45□□□□□ -0.58
RBFOX1-202ENST00000340209 MRPL12P52815 198 aaKnown RBP11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 PAK1Q13153 545 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 SYT10Q6XYQ8 523 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 ANKRD20A12PQ8NF67 263 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 CCDC47Q96A33 483 aaKnown RBP11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 TANGO6Q9C0B7 1094 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 KANSL2Q9H9L4 492 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 FBXO28Q9NVF7 368 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 SPDYE3A6NKU9 549 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 SORBS3O60504 671 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 TRAPPC10P48553 1259 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 GSDMDP57764 484 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 MTRQ99707 1265 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 PNMA6FA0A0J9YX94 578 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 PRCPP42785 496 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 GABPAQ06546 454 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 NELFCDQ8IXH7 590 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 IGSF22Q8N9C0 903 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 CTDP1Q9Y5B0 961 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-202ENST00000340209 NID2Q14112 1375 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 ZBTB5O15062 677 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 MYO1BO43795 1136 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 STIM1Q13586 685 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 KRT79Q5XKE5 535 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 NUDT12Q9BQG2 462 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 LZTFL1Q9NQ48 299 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 IKBKBO14920 756 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 RASSF7Q02833 373 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 SRRTQ9BXP5 876 aaKnown RBP11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 ZBTB21Q9ULJ3 1066 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 ROBO3Q96MS0 1386 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 POLD1P28340 1107 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 MTIF2P46199 727 aaKnown RBP11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 CCZ1BP86790 482 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 CCZ1P86791 482 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 UBXN1Q04323 297 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 HSD3B7Q9H2F3 369 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 DNAI1Q9UI46 699 aa11.43□□□□□ -0.58
RBFOX1-202ENST00000340209 EGFRP00533 1210 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 BMP3P12645 472 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 MTF1Q14872 753 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 DHX36Q9H2U1 1008 aaKnown RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 MYH15Q9Y2K3 1946 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms