RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FAM173BQ6P4H8 233 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 NIM1KQ8IY84 436 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 SRGAP2BP0DMP2 458 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 HSPA6P17066 643 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 CPXCR1Q8N123 301 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 BBS5Q8N3I7 341 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 TGFBRAP1Q8WUH2 860 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 ESRRGP62508 458 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 TCIRG1Q13488 830 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 FAM102BQ5T8I3 360 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 FAM178BQ8IXR5 827 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 OTUD7AQ8TE49 926 aaPredicted RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 NRBP2Q9NSY0 501 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 SYCP2Q9BX26 1530 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 MYL1P05976 194 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 ATICP31939 592 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 ADKP55263 362 aaKnown RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 MGARPQ8TDB4 240 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 MYL10Q9BUA6 226 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 ST7Q9NRC1 585 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 SART1O43290 800 aaKnown RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 JAK2O60674 1132 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 SCG2P13521 617 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 SERPINB6P35237 376 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 CYP2J2P51589 502 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 GUCY2FP51841 1108 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 KPNA2P52292 529 aaKnown RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 PPP2R5AQ15172 486 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 LRGUKQ96M69 825 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 MED10Q9BTT4 135 aa14.28□□□□□ -0.12
HLCS-201ENST00000336648 NSFP46459 744 aaKnown RBP14.27□□□□□ -0.12
HLCS-201ENST00000336648 EXOC8Q8IYI6 725 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 CCHCR1Q8TD31 782 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 MLXIPQ9HAP2 919 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 ZSWIM6Q9HCJ5 1215 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 BTG4Q9NY30 223 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 MED23Q9ULK4 1368 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 S100BP04271 92 aaPredicted RBP14.27□□□□□ -0.12
HLCS-201ENST00000336648 GSTA1P08263 222 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 GSTA2P09210 222 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 MFAP3P55082 362 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 AK8Q96MA6 479 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 GSDMAQ96QA5 445 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 TTLL3Q9Y4R7 772 aa14.27□□□□□ -0.12
HLCS-201ENST00000336648 hCG_1984214I3L0E3 225 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 K7ENM7 598 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 GAP43P17677 238 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 DMP1Q13316 513 aaPredicted RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 NXNQ6DKJ4 435 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 ZNF713Q8N859 430 aaPredicted RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 EFCC1Q9HA90 598 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 KDRP35968 1356 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 MAPKBP1O60336 1514 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 ME3Q16798 604 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 JADE1Q6IE81 842 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 RAB44Q7Z6P3 723 aaPredicted RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 JRKLQ9Y4A0 524 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 PPME1Q9Y570 386 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 TMOD1P28289 359 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 NT5C2P49902 561 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 TFDP1Q14186 410 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
HLCS-201ENST00000336648 ZNF594Q96JF6 807 aaPredicted RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 EPN1Q9Y6I3 576 aaPredicted RBP14.27□□□□□ -0.13
HLCS-201ENST00000336648 ABCB4P21439 1286 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 PTK2Q05397 1052 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 SCYL1Q96KG9 808 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 GPC4O75487 556 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 BSPRYQ5W0U4 402 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 FLAD1Q8NFF5 587 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 USP40Q9NVE5 1235 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 ASXL2Q76L83 1435 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 ATP6V1E1P36543 226 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 RPS8P62241 208 aaKnown RBP14.26□□□□□ -0.13
HLCS-201ENST00000336648 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
HLCS-201ENST00000336648 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
HLCS-201ENST00000336648 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
HLCS-201ENST00000336648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.26□□□□□ -0.13
HLCS-201ENST00000336648 TMEM191BP0C7N4 346 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 ADAM9Q13443 819 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 LRRC8AQ8IWT6 810 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 IFNL3Q8IZI9 196 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 SATB2Q9UPW6 733 aa14.26□□□□□ -0.13
HLCS-201ENST00000336648 LIG3P49916 1009 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms