RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 DDX4Q9NQI0 724 aaKnown RBP16.67■□□□□ 0.26
UBA1-201ENST00000335972 HDAC6Q9UBN7 1215 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 GPR75-ASB3A0A0A6YYF3 556 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 TUBB4AP04350 444 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 BMS1Q14692 1282 aaKnown RBP16.66■□□□□ 0.26
UBA1-201ENST00000335972 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 SLC37A4O43826 429 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 GYS2P54840 703 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 DDR1Q08345 913 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 MCM6Q14566 821 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 NEDD1Q8NHV4 660 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 C6orf50Q9HD87 102 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 IDEP14735 1019 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 LRRC41Q15345 812 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 NCAPH2Q6IBW4 605 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 NEK8Q86SG6 692 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 MB21D1Q8N884 522 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 GLIS3Q8NEA6 775 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 ZMYND12Q9H0C1 365 aa16.66■□□□□ 0.26
UBA1-201ENST00000335972 ARGLU1Q9NWB6 273 aaPredicted RBP16.66■□□□□ 0.26
UBA1-201ENST00000335972 LAMB1P07942 1786 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 PSMA7O14818 248 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 DUSP9Q99956 384 aaKnown RBP16.65■□□□□ 0.26
UBA1-201ENST00000335972 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 EXOC1Q9NV70 894 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 MAGEC2Q9UBF1 373 aaPredicted RBP16.65■□□□□ 0.26
UBA1-201ENST00000335972 REXO2Q9Y3B8 237 aaKnown RBP16.65■□□□□ 0.26
UBA1-201ENST00000335972 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 ST5P78524 1137 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
UBA1-201ENST00000335972 REXO1Q8N1G1 1221 aaKnown RBP16.65■□□□□ 0.26
UBA1-201ENST00000335972 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
UBA1-201ENST00000335972 SRGAP2O75044 1071 aa16.64■□□□□ 0.26
UBA1-201ENST00000335972 ARHGAP25P42331 645 aa16.64■□□□□ 0.26
UBA1-201ENST00000335972 MTIF2P46199 727 aaKnown RBP16.64■□□□□ 0.26
UBA1-201ENST00000335972 CYP27A1Q02318 531 aa16.64■□□□□ 0.26
UBA1-201ENST00000335972 TRIM9Q9C026 710 aa16.64■□□□□ 0.26
UBA1-201ENST00000335972 KCNQ5Q9NR82 932 aa16.64■□□□□ 0.26
UBA1-201ENST00000335972 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 H7C1D1 291 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 SSBP05455 408 aaKnown RBP eCLIP16.64■□□□□ 0.25
UBA1-201ENST00000335972 TAL1P17542 331 aaPredicted RBP16.64■□□□□ 0.25
UBA1-201ENST00000335972 SNAP25P60880 206 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 RAD51AP2Q09MP3 1159 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 CYP26C1Q6V0L0 522 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
UBA1-201ENST00000335972 SPAG1Q07617 926 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 TCP10Q12799 353 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 TTI2Q6NXR4 508 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 TBC1D7Q9P0N9 293 aa16.64■□□□□ 0.25
UBA1-201ENST00000335972 LUC7L2Q9Y383 392 aaKnown RBP16.64■□□□□ 0.25
UBA1-201ENST00000335972 PDHBP11177 359 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 TRIM21P19474 475 aaKnown RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 STIM1Q13586 685 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CC2D1AQ6P1N0 951 aaPredicted RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 TMTC1Q8IUR5 882 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CERS5Q8N5B7 392 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 GIMAP8Q8ND71 665 aaPredicted RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 EPN1Q9Y6I3 576 aaPredicted RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 ZRANB2O95218 330 aaKnown RBP eCLIP16.63■□□□□ 0.25
UBA1-201ENST00000335972 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 TBC1D8BQ0IIM8 1120 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 TERF2Q15554 542 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CAPZA3Q96KX2 299 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 NAA15Q9BXJ9 866 aaKnown RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 CCSER1Q9C0I3 900 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 TTF2Q9UNY4 1162 aaKnown RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 DUSP10Q9Y6W6 482 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CTAGE9A4FU28 777 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 TRIM37O94972 964 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 CT47A1Q5JQC4 288 aaPredicted RBP16.63■□□□□ 0.25
UBA1-201ENST00000335972 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 PNKPQ96T60 521 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
UBA1-201ENST00000335972 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 LGALS16A8MUM7 142 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 KCNK18Q7Z418 384 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 FNBP4Q8N3X1 1017 aaPredicted RBP16.62■□□□□ 0.25
UBA1-201ENST00000335972 PYM1Q9BRP8 204 aaKnown RBP16.62■□□□□ 0.25
UBA1-201ENST00000335972 LRWD1Q9UFC0 647 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 ROBO3Q96MS0 1386 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 NDUFA10O95299 355 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
UBA1-201ENST00000335972 GNA11P29992 359 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms