RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 SEC63Q9UGP8 760 aaKnown RBP26.24■■□□□ 1.79
NDEL1-201ENST00000334527 SOGA3Q5TF21 947 aa26.24■■□□□ 1.79
NDEL1-201ENST00000334527 FAM196AQ6ZSG2 479 aa26.24■■□□□ 1.79
NDEL1-201ENST00000334527 OR8K1Q8NGG5 319 aa26.24■■□□□ 1.79
NDEL1-201ENST00000334527 NAPGQ99747 312 aaPredicted RBP26.24■■□□□ 1.79
NDEL1-201ENST00000334527 JAKMIP3Q5VZ66 844 aa26.23■■□□□ 1.79
NDEL1-201ENST00000334527 NEK8Q86SG6 692 aa26.23■■□□□ 1.79
NDEL1-201ENST00000334527 CEP95Q96GE4 821 aa26.23■■□□□ 1.79
NDEL1-201ENST00000334527 DHTKD1Q96HY7 919 aaPredicted RBP26.23■■□□□ 1.79
NDEL1-201ENST00000334527 MYO1AQ9UBC5 1043 aa26.23■■□□□ 1.79
NDEL1-201ENST00000334527 LUC7L2Q9Y383 392 aaKnown RBP26.23■■□□□ 1.79
NDEL1-201ENST00000334527 NDUFA10O95299 355 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 PRR5LQ6MZQ0 368 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 CSGALNACT2Q8N6G5 542 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 NOC3LQ8WTT2 800 aaKnown RBP26.22■■□□□ 1.79
NDEL1-201ENST00000334527 TRIM9Q9C026 710 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 EPN1Q9Y6I3 576 aaPredicted RBP26.22■■□□□ 1.79
NDEL1-201ENST00000334527 PLCG2P16885 1265 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 PDE4DQ08499 809 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 CCDC47Q96A33 483 aaKnown RBP26.22■■□□□ 1.79
NDEL1-201ENST00000334527 DNAJC7Q99615 494 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 DUSP9Q99956 384 aaKnown RBP26.22■■□□□ 1.79
NDEL1-201ENST00000334527 EXOC1Q9NV70 894 aa26.22■■□□□ 1.79
NDEL1-201ENST00000334527 IL1R1P14778 569 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 TECP42680 631 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 PIGSQ96S52 555 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 GGA1Q9UJY5 639 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 LY75O60449 1722 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 B4DLN1 442 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 ATP2B4P23634 1241 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 ASIC1P78348 528 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 TBCKQ8TEA7 893 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 CAPN11Q9UMQ6 739 aa26.21■■□□□ 1.79
NDEL1-201ENST00000334527 REXO2Q9Y3B8 237 aaKnown RBP26.21■■□□□ 1.79
NDEL1-201ENST00000334527 DNM2P50570 870 aa26.2■■□□□ 1.79
NDEL1-201ENST00000334527 RHBDL3P58872 404 aa26.2■■□□□ 1.79
NDEL1-201ENST00000334527 P2RX5Q93086 422 aa26.2■■□□□ 1.79
NDEL1-201ENST00000334527 EEF2KMTQ96G04 330 aa26.2■■□□□ 1.79
NDEL1-201ENST00000334527 TUBGCP2Q9BSJ2 902 aa26.2■■□□□ 1.79
NDEL1-201ENST00000334527 TSR1Q2NL82 804 aaKnown RBP26.2■■□□□ 1.78
NDEL1-201ENST00000334527 MFSD14BQ5SR56 506 aa26.2■■□□□ 1.78
NDEL1-201ENST00000334527 C7orf25Q9BPX7 421 aa26.2■■□□□ 1.78
NDEL1-201ENST00000334527 ANKZF1Q9H8Y5 726 aa26.2■■□□□ 1.78
NDEL1-201ENST00000334527 BIN2Q9UBW5 565 aaPredicted RBP26.2■■□□□ 1.78
NDEL1-201ENST00000334527 CCDC151A5D8V7 595 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 USP17L5A8MUK1 530 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 TFRCP02786 760 aaKnown RBP26.19■■□□□ 1.78
NDEL1-201ENST00000334527 CCNE1P24864 410 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 UBA5Q9GZZ9 404 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 BICDL2A1A5D9 508 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 SRGNP10124 158 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 SMARCA1P28370 1054 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 STK4Q13043 487 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 BRD3Q15059 726 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 ANKRD40Q6AI12 368 aa26.19■■□□□ 1.78
NDEL1-201ENST00000334527 REXO1Q8N1G1 1221 aaKnown RBP26.19■■□□□ 1.78
NDEL1-201ENST00000334527 TOM1O60784 492 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 FAM193AP78312 1265 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 TRIM10Q9UDY6 481 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 GUCA1BQ9UMX6 200 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 WDR59Q6PJI9 974 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 POTEDQ86YR6 584 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 MMTAG2Q9BU76 263 aaKnown RBP26.18■■□□□ 1.78
NDEL1-201ENST00000334527 FUT8Q9BYC5 575 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 UBXN6Q9BZV1 441 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 TMEM260Q9NX78 707 aa26.18■■□□□ 1.78
NDEL1-201ENST00000334527 FCER1AP12319 257 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 AMPD3Q01432 767 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 WHAMMP3Q1A5X7 153 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 LONRF2Q1L5Z9 754 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 CRY2Q49AN0 593 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 SLF2Q8IX21 1173 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 POLR3GO15318 223 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-201ENST00000334527 CERKQ8TCT0 537 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 CALML4Q96GE6 196 aa26.17■■□□□ 1.78
NDEL1-201ENST00000334527 FAM163AQ96GL9 167 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-201ENST00000334527 CNOT6LQ96LI5 555 aaKnown RBP26.17■■□□□ 1.78
NDEL1-201ENST00000334527 POTEB2H3BUK9 544 aa26.16■■□□□ 1.78
NDEL1-201ENST00000334527 FAM114A1Q8IWE2 563 aa26.16■■□□□ 1.78
NDEL1-201ENST00000334527 FNBP4Q8N3X1 1017 aaPredicted RBP26.16■■□□□ 1.78
NDEL1-201ENST00000334527 FRMPD2Q68DX3 1309 aaPredicted RBP26.16■■□□□ 1.78
NDEL1-201ENST00000334527 THSD7AQ9UPZ6 1657 aa26.16■■□□□ 1.78
NDEL1-201ENST00000334527 TRIM21P19474 475 aaKnown RBP26.15■■□□□ 1.78
NDEL1-201ENST00000334527 TXKP42681 527 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 NOVP48745 357 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 TUBB4BP68371 445 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 TBC1D8BQ0IIM8 1120 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 MSANTD4Q8NCY6 345 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 RBM17Q96I25 401 aaKnown RBP26.15■■□□□ 1.78
NDEL1-201ENST00000334527 USP21Q9UK80 565 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 MYO6Q9UM54 1294 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 GAKO14976 1311 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 ESYT2A0FGR8 921 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 CTAGE15A4D2H0 777 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 CTAGE8P0CG41 777 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 MTIF2P46199 727 aaKnown RBP26.15■■□□□ 1.78
NDEL1-201ENST00000334527 SMC1AQ14683 1233 aaKnown RBP26.15■■□□□ 1.78
NDEL1-201ENST00000334527 CTAGE6Q86UF2 777 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 CTAGE4Q8IX94 777 aa26.15■■□□□ 1.78
NDEL1-201ENST00000334527 PNKPQ96T60 521 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms