RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HPS5Q9UPZ3 1129 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 RCN2Q14257 317 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 KAZNQ674X7 775 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SNRNP48Q6IEG0 339 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 NDUFAF2Q8N183 169 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 ZNF579Q8NAF0 562 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 KLHL14Q9P2G3 628 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 PACSIN2Q9UNF0 486 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 CALUO43852 315 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 PTGS2P35354 604 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 NFYCQ13952 458 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 MYBPC2Q14324 1141 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 EPC2Q52LR7 807 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 LARP1Q6PKG0 1096 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 MYOCDQ8IZQ8 938 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SNX6Q9UNH7 406 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 ANKRD50Q9ULJ7 1429 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 STRNO43815 780 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 KRT37O76014 449 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 CNTLNQ9NXG0 1405 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ADGRL1O94910 1474 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 STK25O00506 426 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 STX7O15400 261 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 HNRNPRO43390 633 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 VCPP55072 806 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 SDE2Q6IQ49 451 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRMT6Q9UJA5 497 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 MAGEB16A2A368 324 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 TFAP4Q01664 338 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 FAM133BQ5BKY9 247 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 SRGAP1Q7Z6B7 1085 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 HFM1A2PYH4 1435 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 I3L4J1 428 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 PLCG2P16885 1265 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 STX5Q13190 355 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 PRKG2Q13237 762 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 EP400NLQ6ZTU2 488 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 TADA2BQ86TJ2 420 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ELAC1Q9H777 363 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 IDEP14735 1019 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 QARSP47897 775 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 RSBN1LQ6PCB5 846 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 PNMA8AQ86V59 439 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 FAM9CQ8IZT9 166 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 TMOD4Q9NZQ9 345 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 DNAJC12Q9UKB3 198 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ASXL2Q76L83 1435 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 RCVRNP35243 200 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ACTN2P35609 894 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRIM23P36406 574 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 IFRD2Q12894 506 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 CADPS2Q86UW7 1296 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ZNF692Q9BU19 519 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 AKAP2Q9Y2D5 859 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 RSPH10B2B2RC85 870 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 RSPH10BP0C881 870 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ME1P48163 572 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 PICALMQ13492 652 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 VSIG1Q86XK7 387 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC36Q8IYA8 594 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC162PA2VCL2 907 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 SGK1O00141 431 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ASAP2O43150 1006 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 FNTAP49354 379 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARHGAP4P98171 946 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 ATF7IPQ6VMQ6 1270 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 NR1H4Q96RI1 486 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
CDC42BPA-201ENST00000334218 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 ATP2B2Q01814 1243 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 SPAG1Q07617 926 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 PTK2BQ14289 1009 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 AKNAD1Q5T1N1 836 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 OTUD5Q96G74 571 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 HSPA1AP0DMV8 641 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 HSPA1BP0DMV9 641 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 VASPP50552 380 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 NUP160Q12769 1436 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 KPNB1Q14974 876 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 CACYBPQ9HB71 228 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 CBFA2T3O75081 653 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 DDX5P17844 614 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRIM25Q14258 630 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 TBC1D1Q86TI0 1168 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 KSR1Q8IVT5 923 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 CSRNP2Q9H175 543 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 PARP2Q9UGN5 583 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 FKBP4Q02790 459 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARID3BQ8IVW6 561 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 ATF4P18848 351 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 GUCY2CP25092 1073 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 STK4Q13043 487 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 FAM83BQ5T0W9 1011 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 XXYLT1Q8NBI6 393 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms