RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 INF2Q27J81 1249 aa26.58■■□□□ 1.85
TSEN54-201ENST00000333213 BICD2Q8TD16 824 aa26.58■■□□□ 1.85
TSEN54-201ENST00000333213 CUL5Q93034 780 aa26.58■■□□□ 1.85
TSEN54-201ENST00000333213 USP17L15C9J2P7 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L13C9JLJ4 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L11C9JVI0 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L18D6R9N7 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L22D6RA61 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L17D6RBQ6 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L19D6RCP7 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L20D6RJB6 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 MEIS2O14770 477 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L24Q0WX57 530 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 TTC38Q5R3I4 469 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 USP17L6PQ6QN14 398 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 P2RX7Q99572 595 aaKnown RBP26.57■■□□□ 1.84
TSEN54-201ENST00000333213 SLC38A10Q9HBR0 1119 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 TMOD4Q9NZQ9 345 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 EDIL3O43854 480 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 TRAPPC10P48553 1259 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 AXDND1Q5T1B0 1012 aaPredicted RBP26.57■■□□□ 1.84
TSEN54-201ENST00000333213 OPTNQ96CV9 577 aa26.57■■□□□ 1.84
TSEN54-201ENST00000333213 NOL7Q9UMY1 257 aaKnown RBP26.57■■□□□ 1.84
TSEN54-201ENST00000333213 PPP6R2O75170 966 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 GJA5P36382 358 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 MRPL12P52815 198 aaKnown RBP26.56■■□□□ 1.84
TSEN54-201ENST00000333213 ZNF174Q15697 407 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 TREML2Q5T2D2 321 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 CATSPERGQ6ZRH7 1159 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 KRT25Q7Z3Z0 450 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 AGBL1Q96MI9 1066 aa26.56■■□□□ 1.84
TSEN54-201ENST00000333213 ITGBL1O95965 494 aaPredicted RBP26.55■■□□□ 1.84
TSEN54-201ENST00000333213 LIG1P18858 919 aa26.55■■□□□ 1.84
TSEN54-201ENST00000333213 CAVIN1Q6NZI2 390 aaKnown RBP26.55■■□□□ 1.84
TSEN54-201ENST00000333213 ATG4CQ96DT6 458 aa26.55■■□□□ 1.84
TSEN54-201ENST00000333213 TMEM63CQ9P1W3 806 aa26.55■■□□□ 1.84
TSEN54-201ENST00000333213 A0A0G2JLL6 359 aaPredicted RBP26.55■■□□□ 1.84
TSEN54-201ENST00000333213 ADALQ6DHV7 355 aa26.55■■□□□ 1.84
TSEN54-201ENST00000333213 PRRT2Q7Z6L0 340 aaPredicted RBP26.55■■□□□ 1.84
TSEN54-201ENST00000333213 KCNH4Q9UQ05 1017 aa26.55■■□□□ 1.84
TSEN54-201ENST00000333213 ICAM1P05362 532 aa26.54■■□□□ 1.84
TSEN54-201ENST00000333213 PPIL2Q13356 520 aa26.54■■□□□ 1.84
TSEN54-201ENST00000333213 NONOQ15233 471 aaKnown RBP eCLIP26.54■■□□□ 1.84
TSEN54-201ENST00000333213 TBCKQ8TEA7 893 aa26.54■■□□□ 1.84
TSEN54-201ENST00000333213 ADAMTS5Q9UNA0 930 aa26.54■■□□□ 1.84
TSEN54-201ENST00000333213 VWA5AO00534 786 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 GRIN1Q05586 938 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 CST9Q5W186 159 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 TBC1D5Q92609 795 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 GOLGA6L4A6NEF3 574 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 CELF2O95319 508 aaKnown RBP26.53■■□□□ 1.84
TSEN54-201ENST00000333213 DSG3P32926 999 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 CLIC6Q96NY7 704 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 GOLPH3LQ9H4A5 285 aa26.53■■□□□ 1.84
TSEN54-201ENST00000333213 GBA2Q9HCG7 927 aaPredicted RBP26.53■■□□□ 1.84
TSEN54-201ENST00000333213 RAVER2Q9HCJ3 691 aaKnown RBP26.53■■□□□ 1.84
TSEN54-201ENST00000333213 CXCL11O14625 94 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 MCM7P33993 719 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 MOGSQ13724 837 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 COG2Q14746 738 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 CPXCR1Q8N123 301 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 REPS2Q8NFH8 660 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 FBXO2Q9UK22 296 aaPredicted RBP26.52■■□□□ 1.84
TSEN54-201ENST00000333213 LOC285556D6RIA3 1793 aa26.52■■□□□ 1.84
TSEN54-201ENST00000333213 POTEEQ6S8J3 1075 aa26.51■■□□□ 1.83
TSEN54-201ENST00000333213 C4orf32Q8N8J7 132 aa26.51■■□□□ 1.83
TSEN54-201ENST00000333213 GLT8D2Q9H1C3 349 aa26.51■■□□□ 1.83
TSEN54-201ENST00000333213 CCPG1Q9ULG6 757 aa26.51■■□□□ 1.83
TSEN54-201ENST00000333213 PTGDRQ13258 359 aa26.51■■□□□ 1.83
TSEN54-201ENST00000333213 CHADLQ6NUI6 762 aa26.51■■□□□ 1.83
TSEN54-201ENST00000333213 CCAR1Q8IX12 1150 aaKnown RBP26.51■■□□□ 1.83
TSEN54-201ENST00000333213 PTPREP23469 700 aa26.5■■□□□ 1.83
TSEN54-201ENST00000333213 HOXA13P31271 388 aaPredicted RBP26.5■■□□□ 1.83
TSEN54-201ENST00000333213 FKBP1BP68106 108 aa26.5■■□□□ 1.83
TSEN54-201ENST00000333213 NEK8Q86SG6 692 aa26.5■■□□□ 1.83
TSEN54-201ENST00000333213 SLC10A4Q96EP9 437 aa26.5■■□□□ 1.83
TSEN54-201ENST00000333213 CEP131Q9UPN4 1083 aa26.5■■□□□ 1.83
TSEN54-201ENST00000333213 MORC2Q9Y6X9 1032 aaPredicted RBP26.5■■□□□ 1.83
TSEN54-201ENST00000333213 A0A1W2PQ27 194 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 A0A1W2PQ64 194 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 A0A1W2PQD8 194 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 UNCXA6NJT0 531 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 SPDYE16A6NNV3 312 aaPredicted RBP26.49■■□□□ 1.83
TSEN54-201ENST00000333213 NR1I2O75469 434 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 ATP2C1P98194 919 aaPredicted RBP26.49■■□□□ 1.83
TSEN54-201ENST00000333213 TRAF1Q13077 416 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 LETM2Q2VYF4 491 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 SHC4Q6S5L8 630 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 GADL1Q6ZQY3 521 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 PROCA1Q8NCQ7 364 aaPredicted RBP26.49■■□□□ 1.83
TSEN54-201ENST00000333213 ABCB11O95342 1321 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 PIK3CDO00329 1044 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 GAS2L3Q86XJ1 694 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 KRI1Q8N9T8 703 aaKnown RBP26.49■■□□□ 1.83
TSEN54-201ENST00000333213 CLEC4DQ8WXI8 215 aa26.49■■□□□ 1.83
TSEN54-201ENST00000333213 MRPL11Q9Y3B7 192 aaKnown RBP26.49■■□□□ 1.83
TSEN54-201ENST00000333213 COL11A1P12107 1806 aaPredicted RBP26.49■■□□□ 1.83
TSEN54-201ENST00000333213 JMYQ8N9B5 988 aa26.48■■□□□ 1.83
TSEN54-201ENST00000333213 TMEM60Q9H2L4 133 aa26.48■■□□□ 1.83
TSEN54-201ENST00000333213 ZNF214Q9UL59 606 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms