RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 PAGE5Q96GU1 130 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 NLRC4Q9NPP4 1024 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 LAD1O00515 517 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 ERLIN2O94905 339 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 TMEM179Q6ZVK1 233 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 MYOCDQ8IZQ8 938 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 KDM3AQ9Y4C1 1321 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 FOSP01100 380 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 EPB41P11171 864 aaKnown RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 EEF2P13639 858 aaKnown RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 PLCG1P19174 1290 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L6PQ6QN14 398 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 HOMEZQ8IX15 550 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 HOOK2Q96ED9 719 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 ZFP91Q96JP5 570 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 STAT2P52630 851 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 TRIM14Q14142 442 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 FAM26FQ5R3K3 315 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 DCAF15Q66K64 600 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 COL23A1Q86Y22 540 aaPredicted RBP10.59□□□□□ -0.71
SS18L1-201ENST00000331758 PIM2Q9P1W9 311 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 POLLQ9UGP5 575 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 FRMD4BQ9Y2L6 1034 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 POLR3GO15318 223 aaPredicted RBP10.59□□□□□ -0.71
SS18L1-201ENST00000331758 PHACTR2O75167 634 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 SYDE2Q5VT97 1194 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 CYP26C1Q6V0L0 522 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 AK8Q96MA6 479 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 TMEM260Q9NX78 707 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 TCRBV5S4A2TA0A5A2 114 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
SS18L1-201ENST00000331758 U2AF2P26368 475 aaKnown RBP eCLIP10.59□□□□□ -0.715e-14■■□□□ 14.5
SS18L1-201ENST00000331758 NT5C2P49902 561 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 CDR1P51861 262 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 MCM6Q14566 821 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 LRRC41Q15345 812 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 ARL6IP4Q66PJ3 421 aaKnown RBP10.59□□□□□ -0.71
SS18L1-201ENST00000331758 TMTC1Q8IUR5 882 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 SLFN12Q8IYM2 578 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 PANK4Q9NVE7 773 aa10.59□□□□□ -0.71
SS18L1-201ENST00000331758 SORBS3O60504 671 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 RASA1P20936 1047 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 TAOK3Q9H2K8 898 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
SS18L1-201ENST00000331758 F5H6K3 240 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 CCDC172P0C7W6 258 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 KLRC3Q07444 240 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 TROAPQ12815 778 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
SS18L1-201ENST00000331758 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 USP37Q86T82 979 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
SS18L1-201ENST00000331758 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
SS18L1-201ENST00000331758 B4DLN1 442 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 MEIS1O00470 390 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 TTBK2Q6IQ55 1244 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 MIER3Q7Z3K6 550 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 ENOX1Q8TC92 643 aaKnown RBP10.58□□□□□ -0.72
SS18L1-201ENST00000331758 PAGR1Q9BTK6 254 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 SH3GLB2Q9NR46 395 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 DISC1Q9NRI5 854 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 GDAQ9Y2T3 454 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 MED1Q15648 1581 aaPredicted RBP10.58□□□□□ -0.72
SS18L1-201ENST00000331758 FAM170AA1A519 330 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 GOLGA6L10A6NI86 522 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 EXOC3O60645 756 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 PDLIM2Q96JY6 352 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 CARD6Q9BX69 1037 aa10.58□□□□□ -0.72
SS18L1-201ENST00000331758 POTEMA6NI47 508 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 hCG_1984214I3L0E3 225 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 ZBTB5O15062 677 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 COPB1P53618 953 aaKnown RBP10.57□□□□□ -0.72
SS18L1-201ENST00000331758 CUL4BQ13620 913 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 EAPPQ56P03 285 aaPredicted RBP10.57□□□□□ -0.72
SS18L1-201ENST00000331758 MCTP2Q6DN12 878 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 RRAGAQ7L523 313 aa10.57□□□□□ -0.72
SS18L1-201ENST00000331758 NLRX1Q86UT6 975 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms