RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CFAP36Q96G28 342 aa11.57□□□□□ -0.56
CLN8-201ENST00000331222 INO80BQ9C086 356 aaPredicted RBP11.57□□□□□ -0.56
CLN8-201ENST00000331222 AP5M1Q9H0R1 490 aa11.57□□□□□ -0.56
CLN8-201ENST00000331222 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
CLN8-201ENST00000331222 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
CLN8-201ENST00000331222 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
CLN8-201ENST00000331222 FGD4Q96M96 766 aa11.57□□□□□ -0.56
CLN8-201ENST00000331222 NUP58Q9BVL2 599 aa11.57□□□□□ -0.56
CLN8-201ENST00000331222 MORC3Q14149 939 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 CHURC1Q8WUH1 139 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 HESX1Q9UBX0 185 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 CPSF3Q9UKF6 684 aaKnown RBP11.56□□□□□ -0.56
CLN8-201ENST00000331222 MESDQ14696 234 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 HADHQ16836 314 aaKnown RBP11.56□□□□□ -0.56
CLN8-201ENST00000331222 CLIC2O15247 247 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 CTNNA1P35221 906 aaKnown RBP11.56□□□□□ -0.56
CLN8-201ENST00000331222 GOLGA8FQ08AF8 430 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 GOLGA8DPQ0D2H9 430 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 NCAPGQ9BPX3 1015 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 TPX2Q9ULW0 747 aaKnown RBP11.56□□□□□ -0.56
CLN8-201ENST00000331222 SUFUQ9UMX1 484 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 ZNF148Q9UQR1 794 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 GOLGA8SH3BPF8 625 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 GNGT2O14610 69 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 MGEA5O60502 916 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 ATICP31939 592 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 RINT1Q6NUQ1 792 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 FTOQ9C0B1 505 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLN8-201ENST00000331222 SYNDIG1Q9H7V2 258 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 MAP3K19Q56UN5 1328 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 KCNJ18B7U540 433 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 KCNJ12Q14500 433 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 KRT40Q6A162 431 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
CLN8-201ENST00000331222 SNX25Q9H3E2 840 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 ANLNQ9NQW6 1124 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
CLN8-201ENST00000331222 ITSN2Q9NZM3 1697 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 TRIM14Q14142 442 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 CDO1Q16878 200 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 RASGRP4Q8TDF6 673 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 HVCN1Q96D96 273 aa11.56□□□□□ -0.56
CLN8-201ENST00000331222 TCOF1Q13428 1488 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 WDR91A4D1P6 747 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 MYL3P08590 195 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 GCKRQ14397 625 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 MROH5Q6ZUA9 1318 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 KIF11P52732 1056 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 HAUS1Q96CS2 278 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 FAM8A1Q9UBU6 413 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 USP19O94966 1318 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 PHBP35232 272 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 YWHAEP62258 255 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 ABCB5Q2M3G0 1257 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 RBM46Q8TBY0 533 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 CABS1Q96KC9 395 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 LRGUKQ96M69 825 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 INTUQ9ULD6 942 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 ACTN1P12814 892 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 YWHAGP61981 247 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLN8-201ENST00000331222 PHEXP78562 749 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 ICA1Q05084 483 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 PDCD6IPQ8WUM4 868 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 CPSF2Q9P2I0 782 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 RALGAPBQ86X10 1494 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 ZBBXA8MT70 800 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 CD58P19256 250 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 C8orf34Q49A92 452 aa11.55□□□□□ -0.56
CLN8-201ENST00000331222 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 IPO11Q9UI26 975 aaKnown RBP11.55□□□□□ -0.56
CLN8-201ENST00000331222 ZSCAN20P17040 1043 aaPredicted RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 BFSP1Q12934 665 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 DNAAF3Q8N9W5 541 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 RIC8AQ9NPQ8 531 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 PALD1Q9ULE6 856 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 ZNF18P17022 549 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 DBN1Q16643 649 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 FAM71BQ8TC56 605 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 KLRF2D3W0D1 207 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 SOX5P35711 763 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 TMEM259Q4ZIN3 620 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 HSPH1Q92598 858 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 ARHGAP45Q92619 1136 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms