RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TAX1BP1Q86VP1 789 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 ERICH1Q86X53 443 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
SHMT2-201ENST00000328923 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
SHMT2-201ENST00000328923 UBN2Q6ZU65 1347 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
SHMT2-201ENST00000328923 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
SHMT2-201ENST00000328923 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 RBL2Q08999 1139 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 TAF11Q15544 211 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 INF2Q27J81 1249 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-201ENST00000328923 PFKFB1P16118 471 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 KIF5BP33176 963 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 PDE4BQ07343 736 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 ANO7Q6IWH7 933 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-201ENST00000328923 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 DSCC1Q9BVC3 393 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
SHMT2-201ENST00000328923 GMNCA6NCL1 334 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 ANXA1P04083 346 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 FUT4P22083 530 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 PDIA3P30101 505 aaKnown RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 DYNC1I2Q13409 638 aaKnown RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 TEX9Q8N6V9 391 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 SLC35B4Q969S0 331 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 SEC62Q99442 399 aaKnown RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
SHMT2-201ENST00000328923 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
SHMT2-201ENST00000328923 ZNF185O15231 689 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 PDHA1P08559 390 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 GHRP10912 638 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 CDC27P30260 824 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 CCDC38Q502W7 563 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 EMC10Q5UCC4 262 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 DMGDHQ9UI17 866 aaKnown RBP13.09□□□□□ -0.31
SHMT2-201ENST00000328923 GUCA1BQ9UMX6 200 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 HPSEQ9Y251 543 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 SAR1BQ9Y6B6 198 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 BZW2Q9Y6E2 419 aaKnown RBP13.09□□□□□ -0.31
SHMT2-201ENST00000328923 FDPSP14324 419 aaKnown RBP13.09□□□□□ -0.31
SHMT2-201ENST00000328923 DESP17661 470 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 STAT6P42226 847 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 SLC7A5Q01650 507 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 PNOCQ13519 176 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 KCNN1Q92952 543 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 NAA15Q9BXJ9 866 aaKnown RBP13.09□□□□□ -0.31
SHMT2-201ENST00000328923 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 MAP3K15Q6ZN16 1313 aa13.09□□□□□ -0.31
SHMT2-201ENST00000328923 TEX33O43247 280 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 ANO1Q5XXA6 986 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 HAUS7Q99871 368 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
SHMT2-201ENST00000328923 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 LNPEPQ9UIQ6 1025 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 SRRM3A6NNA2 597 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-201ENST00000328923 ALADP13716 330 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 SYKP43405 635 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 ITGB3BPQ13352 177 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-201ENST00000328923 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 PROSER3Q2NL68 480 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 NGLY1Q96IV0 654 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 C5P01031 1676 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
SHMT2-201ENST00000328923 A8MUI8 341 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms