RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ZNF605Q86T29 641 aa5.85□□□□□ -1.47
SKP1-201ENST00000328392 ZDHHC15Q96MV8 337 aa5.85□□□□□ -1.47
SKP1-201ENST00000328392 SLC6A17Q9H1V8 727 aa5.85□□□□□ -1.47
SKP1-201ENST00000328392 TNFRSF10DQ9UBN6 386 aa5.85□□□□□ -1.47
SKP1-201ENST00000328392 SUGT1Q9Y2Z0 365 aa5.85□□□□□ -1.47
SKP1-201ENST00000328392 FHOD1Q9Y613 1164 aa5.85□□□□□ -1.47
SKP1-201ENST00000328392 MRPL42Q9Y6G3 142 aaKnown RBP5.85□□□□□ -1.47
SKP1-201ENST00000328392 DBX1A6NMT0 343 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
SKP1-201ENST00000328392 SUSD5O60279 629 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.47
SKP1-201ENST00000328392 ITGA4P13612 1032 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 RAP1GAPP47736 663 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 PPP2R5DQ14738 602 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 ADGRF1Q5T601 910 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 EEPD1Q7L9B9 569 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 SLCO6A1Q86UG4 719 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 JAZF1Q86VZ6 243 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 IRF2BP1Q8IU81 584 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 JMJD8Q96S16 334 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 MCOLN1Q9GZU1 580 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 KLHL25Q9H0H3 589 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 LRP2BPQ9P2M1 347 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.47
SKP1-201ENST00000328392 TSPAN15O95858 294 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 IFNGR1P15260 489 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 SSRP1Q08945 709 aaKnown RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 TCEAL1Q15170 157 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 CWF19L1Q69YN2 538 aaKnown RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 NOP9Q86U38 636 aaKnown RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 LILRB2Q8N423 598 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 BHLHE22Q8NFJ8 381 aaPredicted RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 KCNN1Q92952 543 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 FCRL3Q96P31 734 aaPredicted RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 MCMBPQ9BTE3 642 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 SGPP1Q9BX95 441 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 CCDC113Q9H0I3 377 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 ZNF552Q9H707 407 aaPredicted RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 KANSL2Q9H9L4 492 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 APEX2Q9UBZ4 518 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 TMA7Q9Y2S6 64 aaKnown RBP5.83□□□□□ -1.48
SKP1-201ENST00000328392 MSRB2Q9Y3D2 182 aa5.83□□□□□ -1.48
SKP1-201ENST00000328392 KDM2BQ8NHM5 1336 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 VAMP4O75379 141 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 CD3EP07766 207 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 TMEM253P0C7T8 217 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 PNLIPP16233 465 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 ATG14Q6ZNE5 492 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 SLC26A8Q96RN1 970 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 CRTAC1Q9NQ79 661 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 WHRNQ9P202 907 aa5.82□□□□□ -1.48
SKP1-201ENST00000328392 SF3B6Q9Y3B4 125 aaKnown RBP5.82□□□□□ -1.48
SKP1-201ENST00000328392 A0A087WZG4 1122 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 A0A1W2PQ45 241 aaPredicted RBP5.81□□□□□ -1.48
SKP1-201ENST00000328392 A0A1W2PQY0 241 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 WTIPA6NIX2 430 aaPredicted RBP5.81□□□□□ -1.48
SKP1-201ENST00000328392 NFIBO00712 420 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 FGF10O15520 208 aaPredicted RBP5.81□□□□□ -1.48
SKP1-201ENST00000328392 MSL3P1P0C860 447 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 PRKCAP17252 672 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 CFPP27918 469 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 RASGRF1Q13972 1273 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 SLC10A6Q3KNW5 377 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 GALNT18Q6P9A2 607 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 ZNF513Q8N8E2 541 aaPredicted RBP5.81□□□□□ -1.48
SKP1-201ENST00000328392 NAT16Q8N8M0 369 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 MKL1Q969V6 931 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 APBA2Q99767 749 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 IMPACTQ9P2X3 320 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 DIS3Q9Y2L1 958 aaKnown RBP5.81□□□□□ -1.48
SKP1-201ENST00000328392 TAF6LQ9Y6J9 622 aa5.81□□□□□ -1.48
SKP1-201ENST00000328392 TLDC2A0PJX2 215 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 OR14I1A6ND48 311 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 NPIPB6E9PJ23 425 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 ENDOUP21128 410 aaKnown RBP5.8□□□□□ -1.48
SKP1-201ENST00000328392 DLG4P78352 724 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 MVKQ03426 396 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 DPY19L1Q2PZI1 675 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 C1QL4Q86Z23 238 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 FAM177A1Q8N128 213 aaPredicted RBP5.8□□□□□ -1.48
SKP1-201ENST00000328392 NUP43Q8NFH3 380 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 SH3TC2Q8TF17 1288 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 GCM1Q9NP62 436 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 CD320Q9NPF0 282 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 ACSL6Q9UKU0 697 aa5.8□□□□□ -1.48
SKP1-201ENST00000328392 SMG5Q9UPR3 1016 aaKnown RBP5.8□□□□□ -1.48
SKP1-201ENST00000328392 BTBD11A6QL63 1104 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 STXBP3O00186 592 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 TBX1O43435 398 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 PEX10O60683 326 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 PPM1BO75688 479 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 ITGAVP06756 1048 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 GLDCP23378 1020 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 NOP2P46087 812 aaKnown RBP5.79□□□□□ -1.48
SKP1-201ENST00000328392 CYP4F8P98187 520 aa5.79□□□□□ -1.48
SKP1-201ENST00000328392 POU4F1Q01851 419 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms