RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 CCDC155Q8N6L0 562 aa15.91■□□□□ 0.14
CHRNA3-201ENST00000326828 OSBPL9Q96SU4 736 aa15.91■□□□□ 0.14
CHRNA3-201ENST00000326828 TMEM60Q9H2L4 133 aa15.91■□□□□ 0.14
CHRNA3-201ENST00000326828 EPB41L5Q9HCM4 733 aa15.91■□□□□ 0.14
CHRNA3-201ENST00000326828 SLC39A2Q9NP94 309 aa15.91■□□□□ 0.14
CHRNA3-201ENST00000326828 RASSF10A6NK89 507 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 OPA1O60313 960 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 DTHD1Q6ZMT9 781 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 CCDC91Q7Z6B0 441 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 UIMC1Q96RL1 719 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 NLRC4Q9NPP4 1024 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 GEMIN8Q9NWZ8 242 aaKnown RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 FAM205AQ6ZU69 1335 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 USP17L21D6R901 530 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 BMP15O95972 392 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 IFT88Q13099 833 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 CT47A1Q5JQC4 288 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 CFAP58Q5T655 872 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 ZNF507Q8TCN5 953 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 RPGRIP1Q96KN7 1286 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 CPVLQ9H3G5 476 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 DISC1Q9NRI5 854 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 PCDHA13Q9Y5I0 950 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 SHOX2O60902 331 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 FTCDO95954 541 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 VAV2P52735 878 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 SETQ01105 290 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 GFPT1Q06210 699 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 STK4Q13043 487 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 STIM2Q9P246 746 aa15.9■□□□□ 0.14
CHRNA3-201ENST00000326828 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ECM2O94769 699 aaPredicted RBP15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 SCG2P13521 617 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ATF3P18847 181 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 FUT2Q10981 343 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 KLHL7Q8IXQ5 586 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 AMOTL1Q8IY63 956 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 SALL4Q9UJQ4 1053 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 PCDH11XQ9BZA7 1347 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 PCDH11YQ9BZA8 1340 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ECM29Q5VYK3 1845 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 GLI1P08151 1106 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 KIF11P52732 1056 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ZBED6P86452 979 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ACTN3Q08043 901 aaPredicted RBP15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 TROAPQ12815 778 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ZBTB1Q9Y2K1 713 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 PDS5AQ29RF7 1337 aaKnown RBP15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 GOLGA8KD6RF30 607 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 STARD3NLO95772 234 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 SRGNP10124 158 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 CYP2D6P10635 497 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 MAGEA1P43355 309 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 EP400NLQ6ZTU2 488 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 TMTC3Q6ZXV5 915 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 ARHGAP20Q9P2F6 1191 aa15.89■□□□□ 0.13
CHRNA3-201ENST00000326828 MYH13Q9UKX3 1938 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 E7EVH7 732 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 EEF1GP26641 437 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 HAUS3Q68CZ6 603 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 DYMQ7RTS9 669 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 DNAAF5Q86Y56 855 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 TRIM58Q8NG06 486 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 OR2W6PQ8NHA6 318 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 DUSP9Q99956 384 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 YY1AP1Q9H869 796 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 PDE8AO60658 829 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 HEXIM1O94992 359 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 GNAT2P19087 354 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 CEP57Q86XR8 500 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 LRRC15Q8TF66 581 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 ALS2CR12Q96Q35 445 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 KRT12Q99456 494 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 CXorf56Q9H5V9 222 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 SLIT3O75094 1523 aa15.88■□□□□ 0.13
CHRNA3-201ENST00000326828 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 EPHB4P54760 987 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 TTI2Q6NXR4 508 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 TNFRSF25Q93038 417 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 CACNA2D4Q7Z3S7 1137 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 FAM212AQ96EL1 285 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 CPP00450 1065 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 PLCG1P19174 1290 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 EVA1CP58658 441 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 HDLBPQ00341 1268 aaKnown RBP15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 SUGP1Q8IWZ8 645 aaKnown RBP15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHRNA3-201ENST00000326828 GOLPH3Q9H4A6 298 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms