RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 HIP1O00291 1037 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 ASGR1P07306 291 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 RAG1P15918 1043 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 CDK7P50613 346 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 TNFAIP2Q03169 654 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 FAAP100Q0VG06 881 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 RRP12Q5JTH9 1297 aaKnown RBP20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 CCDC174Q6PII3 467 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 ZNF589Q86UQ0 364 aaPredicted RBP20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 SEZ6LQ9BYH1 1024 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 CCPG1Q9ULG6 757 aa20.85■□□□□ 0.93
PTPMT1-201ENST00000326656 SYDE2Q5VT97 1194 aa20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 IQSEC1Q6DN90 963 aa20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 B4GALNT3Q6L9W6 998 aa20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 MORC4Q8TE76 937 aa20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 ESR2Q92731 530 aa20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 ADD3Q9UEY8 706 aaKnown RBP20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 Q9Y3F1 56 aa20.84■□□□□ 0.93
PTPMT1-201ENST00000326656 A0A0C4DFX4 3053 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 ZNF213O14771 459 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 ADCY6O43306 1168 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 CABYRO75952 493 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 IGHDP01880 384 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 SMAD3P84022 425 aaKnown RBP20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 CCDC178Q5BJE1 867 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 MUM1L1Q5H9M0 696 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 C9orf50Q5SZB4 431 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 DGKHQ86XP1 1220 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 CHMP4CQ96CF2 233 aa20.83■□□□□ 0.93
PTPMT1-201ENST00000326656 CUL9Q8IWT3 2517 aa20.83■□□□□ 0.92
PTPMT1-201ENST00000326656 A0A0U1RQG5 324 aaPredicted RBP20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 MYADML2A6NDP7 307 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 ARVCFO00192 962 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 CTAGE5O15320 804 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 TIMP1P01033 207 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 SNHG28P0DPA3 235 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 PDHBP11177 359 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 ITGB8P26012 769 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 HAND2P61296 217 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 FPGSQ05932 587 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 TTBK2Q6IQ55 1244 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 VTI1AQ96AJ9 217 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 MAF1Q9H063 256 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 VTA1Q9NP79 307 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 TBX21Q9UL17 535 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 MTMR7Q9Y216 660 aa20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 GNEQ9Y223 722 aaKnown RBP20.82■□□□□ 0.92
PTPMT1-201ENST00000326656 SLC16A2P36021 539 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 SNAP25P60880 206 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 ZNF543Q08ER8 600 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 GPATCH4Q5T3I0 446 aaKnown RBP20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 NSMFQ6X4W1 530 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 NOL8Q76FK4 1167 aaKnown RBP20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 AP5M1Q9H0R1 490 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 DIAPH3Q9NSV4 1193 aa20.81■□□□□ 0.92
PTPMT1-201ENST00000326656 ASTN1O14525 1302 aa20.8■□□□□ 0.92
PTPMT1-201ENST00000326656 ZEB2O60315 1214 aa20.8■□□□□ 0.92
PTPMT1-201ENST00000326656 ZNF697Q5TEC3 545 aa20.8■□□□□ 0.92
PTPMT1-201ENST00000326656 TAPT1Q6NXT6 567 aa20.8■□□□□ 0.92
PTPMT1-201ENST00000326656 RASGRP2Q7LDG7 609 aa20.8■□□□□ 0.92
PTPMT1-201ENST00000326656 WDR19Q8NEZ3 1342 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 TLR3O15455 904 aaKnown RBP20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 BAATQ14032 418 aaPredicted RBP20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 MFSD5Q6N075 450 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 CWC27Q6UX04 472 aaKnown RBP20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 TLK2Q86UE8 772 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 IQCA1Q86XH1 822 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 TBC1D10CQ8IV04 446 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 SLC43A3Q8NBI5 491 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 ANKS1AQ92625 1134 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 MPHOSPH6Q99547 160 aaKnown RBP20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 CTNNA3Q9UI47 895 aa20.79■□□□□ 0.92
PTPMT1-201ENST00000326656 FRMPD2Q68DX3 1309 aaPredicted RBP20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 TMEM265A0A087WTH1 108 aa20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 SMPD1P17405 629 aa20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 IRX5P78411 483 aaPredicted RBP20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 FSCN1Q16658 493 aaKnown RBP20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 EXOC6Q8TAG9 804 aa20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 RNPC3Q96LT9 517 aaKnown RBP20.78■□□□□ 0.92
PTPMT1-201ENST00000326656 B4DLN1 442 aa20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 DYNC1LI2O43237 492 aaPredicted RBP20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 MRPL12P52815 198 aaKnown RBP20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 EPHB4P54760 987 aa20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 DUSP28Q4G0W2 176 aa20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 RGS22Q8NE09 1264 aa20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 GUCD1Q96NT3 240 aa20.77■□□□□ 0.92
PTPMT1-201ENST00000326656 RBM47A0AV96 593 aaKnown RBP20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 NFIBO00712 420 aa20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 CD4P01730 458 aa20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 ALDH5A1P51649 535 aaPredicted RBP20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 BEX3Q00994 111 aa20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 PPIGQ13427 754 aaKnown RBP eCLIP20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 IMMTQ16891 758 aaKnown RBP20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 RNF207Q6ZRF8 634 aa20.76■□□□□ 0.91
PTPMT1-201ENST00000326656 KIAA1211Q6ZU35 1233 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms