RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 LETM2Q2VYF4 491 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 C11orf57Q6ZUT1 292 aaPredicted RBP20.24■□□□□ 0.83
RAB39A-201ENST00000320578 LUZP1Q86V48 1076 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 TRIML1Q8N9V2 468 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 CCSER1Q9C0I3 900 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 TMEM260Q9NX78 707 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 FEM1BQ9UK73 627 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 IKQ13123 557 aaPredicted RBP20.23■□□□□ 0.83
RAB39A-201ENST00000320578 E2F4Q16254 413 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 KIAA1755Q5JYT7 1200 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 LPAR1Q92633 364 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 SYT17Q9BSW7 474 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 ZNF341Q9BYN7 854 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 KIAA1683Q9H0B3 1180 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 PITPNM2Q9BZ72 1349 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 FOSP01100 380 aaPredicted RBP20.23■□□□□ 0.83
RAB39A-201ENST00000320578 PNOCQ13519 176 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
RAB39A-201ENST00000320578 RANBP17Q9H2T7 1088 aaKnown RBP20.23■□□□□ 0.83
RAB39A-201ENST00000320578 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
RAB39A-201ENST00000320578 A0A087X0B3 334 aa20.22■□□□□ 0.83
RAB39A-201ENST00000320578 EDIL3O43854 480 aa20.22■□□□□ 0.83
RAB39A-201ENST00000320578 USP11P51784 963 aa20.22■□□□□ 0.83
RAB39A-201ENST00000320578 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
RAB39A-201ENST00000320578 MOXD1Q6UVY6 613 aa20.22■□□□□ 0.83
RAB39A-201ENST00000320578 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
RAB39A-201ENST00000320578 MTMR9Q96QG7 549 aa20.22■□□□□ 0.83
RAB39A-201ENST00000320578 ASTN2O75129 1339 aaPredicted RBP20.22■□□□□ 0.83
RAB39A-201ENST00000320578 GOLGA6L19H0YKK7 550 aa20.21■□□□□ 0.83
RAB39A-201ENST00000320578 PIK3CDO00329 1044 aa20.21■□□□□ 0.83
RAB39A-201ENST00000320578 SMC2O95347 1197 aa20.21■□□□□ 0.83
RAB39A-201ENST00000320578 ADCY5O95622 1261 aa20.21■□□□□ 0.83
RAB39A-201ENST00000320578 CT47A1Q5JQC4 288 aaPredicted RBP20.21■□□□□ 0.83
RAB39A-201ENST00000320578 ANGEL2Q5VTE6 544 aaKnown RBP20.21■□□□□ 0.83
RAB39A-201ENST00000320578 SPICE1Q8N0Z3 855 aa20.21■□□□□ 0.83
RAB39A-201ENST00000320578 DHX58Q96C10 678 aa20.21■□□□□ 0.83
RAB39A-201ENST00000320578 MEIS2O14770 477 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
RAB39A-201ENST00000320578 DPCR1Q3MIW9 517 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 NBPF12Q5TAG4 269 aaPredicted RBP20.2■□□□□ 0.82
RAB39A-201ENST00000320578 SARM1Q6SZW1 724 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 PDILTQ8N807 584 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 TRPM4Q8TD43 1214 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 WDR18Q9BV38 432 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 CYP3A7-CYP3A51PA0A087WV96 503 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 BECN2A8MW95 431 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 CYP3A7P24462 503 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 FXR2P51116 673 aaKnown RBP eCLIP20.2■□□□□ 0.82
RAB39A-201ENST00000320578 UBE2SQ16763 222 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 DHX40Q8IX18 779 aaKnown RBP20.2■□□□□ 0.82
RAB39A-201ENST00000320578 SMARCE1Q969G3 411 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 PAGE5Q96GU1 130 aa20.2■□□□□ 0.82
RAB39A-201ENST00000320578 SMTNL1A8MU46 457 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 IKBKBO14920 756 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 SBF1O95248 1867 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 SEMA3FQ13275 785 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 PDIA5Q14554 519 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 IGSF22Q8N9C0 903 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 MBOAT7Q96N66 472 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 CUEDC2Q9H467 287 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 MAGEF1Q9HAY2 307 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 CCDC39Q9UFE4 941 aa20.19■□□□□ 0.82
RAB39A-201ENST00000320578 MYL1P05976 194 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 UBA7P41226 1012 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 USP14P54578 494 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 CALCRLQ16602 461 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 PDXDC2PQ6P474 469 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 SCYL3Q8IZE3 742 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 MLKLQ8NB16 471 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 CRYGNQ8WXF5 182 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 GSDMAQ96QA5 445 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 ANO3Q9BYT9 981 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 DISC1Q9NRI5 854 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 FOXN1O15353 648 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 EPS15P42566 896 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 HIRAP54198 1017 aaPredicted RBP20.18■□□□□ 0.82
RAB39A-201ENST00000320578 MORC3Q14149 939 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 FEZ1Q99689 392 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 GLIS2Q9BZE0 524 aaPredicted RBP20.18■□□□□ 0.82
RAB39A-201ENST00000320578 RAB34Q9BZG1 259 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 ADARB2Q9NS39 739 aaKnown RBP20.18■□□□□ 0.82
RAB39A-201ENST00000320578 DACH1Q9UI36 760 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 MAN1B1Q9UKM7 699 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 PNMA2Q9UL42 364 aa20.18■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L15C9J2P7 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L13C9JLJ4 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L11C9JVI0 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L18D6R9N7 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L22D6RA61 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L17D6RBQ6 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L19D6RCP7 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L20D6RJB6 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 BIN1O00499 593 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 AP5Z1O43299 807 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L24Q0WX57 530 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 DPYDQ12882 1025 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 SUPT20HL1Q3ZLR7 823 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 USP17L6PQ6QN14 398 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 AS3MTQ9HBK9 375 aa20.17■□□□□ 0.82
RAB39A-201ENST00000320578 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 645.4 ms