RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 TRIM75PA6NK02 468 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 FOXN1O15353 648 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 ATP5JP18859 108 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 KCNJ6P48051 423 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 IREB2P48200 963 aaKnown RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 AP1ARQ63HQ0 302 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 IGSF22Q8N9C0 903 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 ZNF483Q8TF39 744 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 AIDAQ96BJ3 306 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 MTMR7Q9Y216 660 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 GPR75-ASB3A0A0A6YYF3 556 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 KINO60870 393 aaKnown RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 GCKP35557 465 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 ECE1P42892 770 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 ZNF513Q8N8E2 541 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 OPTNQ96CV9 577 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 SALL3Q9BXA9 1300 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 RASSF10A6NK89 507 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 POTEDQ86YR6 584 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 CLEC10AQ8IUN9 316 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 MTMR14Q8NCE2 650 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 PARD3BQ8TEW8 1205 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 HNRNPLLQ8WVV9 542 aaKnown RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 DYNLL2Q96FJ2 89 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 HAUS7Q99871 368 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 LSG1Q9H089 658 aaKnown RBP10.55□□□□□ -0.72
CAPN3-201ENST00000318023 KIF9Q9HAQ2 790 aa10.55□□□□□ -0.72
CAPN3-201ENST00000318023 HDLBPQ00341 1268 aaKnown RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 NAA25Q14CX7 972 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 FAM151AQ8WW52 585 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 ETAA1Q9NY74 926 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 SUGT1Q9Y2Z0 365 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 SLC4A4Q9Y6R1 1079 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 PITPNM2Q9BZ72 1349 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 CHUKO15111 745 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 ZSCAN12O43309 604 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 PRDM1O75626 825 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 SYF2O95926 243 aaKnown RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 PLCD1P51178 756 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 PREPLQ4J6C6 727 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 NAT10Q9H0A0 1025 aaKnown RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 A1CFQ9NQ94 594 aaKnown RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 SH2B1Q9NRF2 756 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-201ENST00000318023 ZHX2Q9Y6X8 837 aa10.54□□□□□ -0.72
CAPN3-201ENST00000318023 FLT1P17948 1338 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 SALL1Q9NSC2 1324 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 HTTP42858 3142 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 CUTAO60888 179 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 SNX1Q13596 522 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 RASAL3Q86YV0 1011 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 OSBP2Q969R2 916 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.53□□□□□ -0.72
CAPN3-201ENST00000318023 MYH13Q9UKX3 1938 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 GAKO14976 1311 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 SSBP05455 408 aaKnown RBP eCLIP10.53□□□□□ -0.72
CAPN3-201ENST00000318023 ERCC3P19447 782 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 GJA5P36382 358 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-201ENST00000318023 ZKSCAN8Q15776 578 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-201ENST00000318023 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 SRGAP1Q7Z6B7 1085 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 PI4K2BQ8TCG2 481 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 TATDN2Q93075 761 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
CAPN3-201ENST00000318023 RPSAP08865 295 aaKnown RBP10.53□□□□□ -0.72
CAPN3-201ENST00000318023 MYBL2P10244 700 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 NOGQ13253 232 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 HSP90AA4PQ58FG1 418 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 ZBTB10Q96DT7 871 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 R3HDMLQ9H3Y0 253 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 LZTFL1Q9NQ48 299 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 RAB21Q9UL25 225 aa10.53□□□□□ -0.72
CAPN3-201ENST00000318023 A0A0U1RQJ8 604 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 TMEM232C9JQI7 657 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 JAK2O60674 1132 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 PEX10O60683 326 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 PRPF6O94906 941 aaKnown RBP10.52□□□□□ -0.73
CAPN3-201ENST00000318023 PDCP20941 246 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 IRAK1P51617 712 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 FANCCQ00597 558 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 PTH1RQ03431 593 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 RRP1BQ14684 758 aaKnown RBP10.52□□□□□ -0.73
CAPN3-201ENST00000318023 CRYMQ14894 314 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 E2F5Q15329 346 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 PDILTQ8N807 584 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 ATRIPQ8WXE1 791 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 SDF4Q9BRK5 362 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms