RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 ITGB8P26012 769 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 SLC16A2P36021 539 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
FOXR1-201ENST00000317011 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 CWC27Q6UX04 472 aaKnown RBP18.32■□□□□ 0.52
FOXR1-201ENST00000317011 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
FOXR1-201ENST00000317011 PDE4AP27815 886 aa18.31■□□□□ 0.52
FOXR1-201ENST00000317011 ZNF543Q08ER8 600 aa18.31■□□□□ 0.52
FOXR1-201ENST00000317011 FAM109BQ6ICB4 259 aaPredicted RBP18.31■□□□□ 0.52
FOXR1-201ENST00000317011 TAPT1Q6NXT6 567 aa18.31■□□□□ 0.52
FOXR1-201ENST00000317011 PCSK9Q8NBP7 692 aaKnown RBP18.31■□□□□ 0.52
FOXR1-201ENST00000317011 ESR2Q92731 530 aa18.31■□□□□ 0.52
FOXR1-201ENST00000317011 BADQ92934 168 aa18.31■□□□□ 0.52
FOXR1-201ENST00000317011 CCPG1Q9ULG6 757 aa18.31■□□□□ 0.52
FOXR1-201ENST00000317011 LOC102724159A0A0B4J2E5 919 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 CLTBP09497 229 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 FAAP100Q0VG06 881 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 PWP2Q15269 919 aaKnown RBP18.3■□□□□ 0.52
FOXR1-201ENST00000317011 CCDC96Q2M329 555 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 IQSEC1Q6DN90 963 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 STARD7Q9NQZ5 370 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 ISY1Q9ULR0 285 aaKnown RBP18.3■□□□□ 0.52
FOXR1-201ENST00000317011 Q9Y3F1 56 aa18.3■□□□□ 0.52
FOXR1-201ENST00000317011 NEDD4P46934 1319 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.29■□□□□ 0.52
FOXR1-201ENST00000317011 ASGR1P07306 291 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 SHHQ15465 462 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 IL25Q9H293 177 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 SPC25Q9HBM1 224 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 GPCPD1Q9NPB8 672 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 DIAPH3Q9NSV4 1193 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 MTMR10Q9NXD2 777 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 MTMR7Q9Y216 660 aa18.29■□□□□ 0.52
FOXR1-201ENST00000317011 FRMPD2Q68DX3 1309 aaPredicted RBP18.28■□□□□ 0.52
FOXR1-201ENST00000317011 C6orf222P0C671 652 aaPredicted RBP18.28■□□□□ 0.52
FOXR1-201ENST00000317011 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
FOXR1-201ENST00000317011 GNASQ5JWF2 1037 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 DEFB123Q8N688 67 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 SLC43A3Q8NBI5 491 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 RGS22Q8NE09 1264 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 PURBQ96QR8 312 aaKnown RBP18.28■□□□□ 0.52
FOXR1-201ENST00000317011 MAF1Q9H063 256 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 PRDM5Q9NQX1 630 aaPredicted RBP18.28■□□□□ 0.52
FOXR1-201ENST00000317011 CTNNA3Q9UI47 895 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 LAMA2P24043 3122 aaKnown RBP18.28■□□□□ 0.52
FOXR1-201ENST00000317011 COL6A3P12111 3177 aa18.28■□□□□ 0.52
FOXR1-201ENST00000317011 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 RBM47A0AV96 593 aaKnown RBP18.27■□□□□ 0.52
FOXR1-201ENST00000317011 NFIBO00712 420 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 GSPT1P15170 499 aaKnown RBP18.27■□□□□ 0.52
FOXR1-201ENST00000317011 SMPD1P17405 629 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 C9orf50Q5SZB4 431 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 GPATCH4Q5T3I0 446 aaKnown RBP18.27■□□□□ 0.52
FOXR1-201ENST00000317011 NSMFQ6X4W1 530 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 GLT1D1Q96MS3 346 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
FOXR1-201ENST00000317011 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
FOXR1-201ENST00000317011 DCDC2CA8MYV0 355 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 ARVCFO00192 962 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 PQBP1O60828 265 aaKnown RBP18.26■□□□□ 0.51
FOXR1-201ENST00000317011 KDM4AO75164 1064 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 Q7L0L9 218 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 TBX21Q9UL17 535 aa18.26■□□□□ 0.51
FOXR1-201ENST00000317011 B4E1Z4 1266 aa18.25■□□□□ 0.51
FOXR1-201ENST00000317011 EPHB4P54760 987 aa18.25■□□□□ 0.51
FOXR1-201ENST00000317011 IMMTQ16891 758 aaKnown RBP18.25■□□□□ 0.51
FOXR1-201ENST00000317011 TMEM63BQ5T3F8 832 aa18.25■□□□□ 0.51
FOXR1-201ENST00000317011 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
FOXR1-201ENST00000317011 ENAHQ8N8S7 591 aaPredicted RBP18.25■□□□□ 0.51
FOXR1-201ENST00000317011 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
FOXR1-201ENST00000317011 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
FOXR1-201ENST00000317011 ADD3Q9UEY8 706 aaKnown RBP18.25■□□□□ 0.51
FOXR1-201ENST00000317011 MROH7Q68CQ1 1323 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 MCM3APO60318 1980 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 A0A0U1RQG5 324 aaPredicted RBP18.24■□□□□ 0.51
FOXR1-201ENST00000317011 DYNC1LI2O43237 492 aaPredicted RBP18.24■□□□□ 0.51
FOXR1-201ENST00000317011 CABYRO75952 493 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 TIMP1P01033 207 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 CD4P01730 458 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 EDNRBP24530 442 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 ALDH5A1P51649 535 aaPredicted RBP18.24■□□□□ 0.51
FOXR1-201ENST00000317011 SEZ6LQ9BYH1 1024 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 KRT23Q9C075 422 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 STXBP5LQ9Y2K9 1186 aa18.24■□□□□ 0.51
FOXR1-201ENST00000317011 GRIN2DO15399 1336 aa18.23■□□□□ 0.51
FOXR1-201ENST00000317011 GOLGA8HP0CJ92 632 aa18.23■□□□□ 0.51
FOXR1-201ENST00000317011 RAG1P15918 1043 aa18.23■□□□□ 0.51
FOXR1-201ENST00000317011 PTGS1P23219 599 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms