RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MAATS1Q7Z4T9 603 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ANKS4BQ8N8V4 417 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ZNF473Q8WTR7 871 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ZBTB3Q9H5J0 574 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 GMNCA6NCL1 334 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 MCAMP43121 646 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 IRX1P78414 480 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CLUL1Q15846 466 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SLC9C1Q4G0N8 1177 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 VWA3BQ502W6 1294 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 RRP12Q5JTH9 1297 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 PDXDC2PQ6P474 469 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CNNM4Q6P4Q7 775 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 IRF2BP1Q8IU81 584 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TEX11Q8IYF3 940 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 LMBR1Q8WVP7 490 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ZNF594Q96JF6 807 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TTYH3Q9C0H2 523 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TAOK2Q9UL54 1235 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TOPAZ1Q8N9V7 1692 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TNKSO95271 1327 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CES2O00748 559 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 LCA5LO95447 670 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ADORA1P30542 326 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 NLRP5P59047 1200 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ZNF174Q15697 407 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 AGBL2Q5U5Z8 902 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ARL8AQ96BM9 186 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ANKRD27Q96NW4 1050 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SETD1AO15047 1707 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 PXDNQ92626 1479 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 NBPF26B4DH59 902 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SRGAP2O75044 1071 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TFRCP02786 760 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 RIPK1Q13546 671 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 PUM3Q15397 648 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CDC37Q16543 378 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SPDYCQ5MJ68 293 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 HAUS3Q68CZ6 603 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 NBPF10Q6P3W6 841 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 DTHD1Q6ZMT9 781 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 NBPF15Q8N660 670 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 GDF3Q9NR23 364 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SAMM50Q9Y512 469 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CFAP65Q6ZU64 1925 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 MROH5Q6ZUA9 1318 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 PVALEFA0A1B0GWK0 134 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 RNF225M0QZC1 329 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 GSTA1P08263 222 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 MATR3P43243 847 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 KIF11P52732 1056 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CYP27A1Q02318 531 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 IFT88Q13099 833 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TTI2Q6NXR4 508 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TTLL7Q6ZT98 887 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CEP57Q86XR8 500 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 PARP9Q8IXQ6 854 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC13Q8IYE1 715 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 RBM33Q96EV2 1170 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC43Q96MW1 224 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ATP6V0A4Q9HBG4 840 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SH3GLB2Q9NR46 395 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 DISC1Q9NRI5 854 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 RIPOR2Q9Y4F9 1068 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 MAN2A1Q16706 1144 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 KIF6Q6ZMV9 814 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 SMYD4Q8IYR2 804 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ZBTB38Q8NAP3 1195 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 OXER1Q8TDS5 423 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 MIEF2Q96C03 454 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ZIM3Q96PE6 472 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 PIH1D3Q9NQM4 214 aaKnown RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 ANAPC4Q9UJX5 808 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 TSPOAP1O95153 1857 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 A0A0G2JS52 829 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 C5orf60A6NFR6 353 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 ZMYND10O75800 440 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 GBP2P32456 591 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-201ENST00000316707 SCARF1Q14162 830 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 MSL1Q68DK7 614 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 TMTC3Q6ZXV5 915 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 FUKQ8N0W3 1084 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 STMN4Q9H169 189 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-201ENST00000316707 PLEKHA4Q9H4M7 779 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 KBTBD4Q9NVX7 518 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 PCDHA13Q9Y5I0 950 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 SLC4A4Q9Y6R1 1079 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 N4BP2Q86UW6 1770 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-201ENST00000316707 CFAP73A6NFT4 308 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 SCG2P13521 617 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 GUCY1A2P33402 732 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 PRCPP42785 496 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 LACTB2Q53H82 288 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-201ENST00000316707 C10orf76Q5T2E6 689 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 C6orf89Q6UWU4 347 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 CPLX4Q7Z7G2 160 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC82Q8N4S0 544 aa5.28□□□□□ -1.56
PTPN13-201ENST00000316707 GBP7Q8N8V2 638 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-201ENST00000316707 ZKSCAN4Q969J2 545 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-201ENST00000316707 NSRP1Q9H0G5 558 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms