RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PPFIA3O75145 1194 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 SLC3A2P08195 630 aaKnown RBP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 RPS12P25398 132 aaKnown RBP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 SYKP43405 635 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 MAGEB6Q8N7X4 407 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 SPZ1Q9BXG8 430 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 SIX2Q9NPC8 291 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 CEP126Q9P2H0 1117 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 MARCKSP29966 332 aaPredicted RBP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 CBLBQ13191 982 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 STAG2Q8N3U4 1231 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 CCDC112Q8NEF3 446 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 RABGGTAQ92696 567 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 CNTNAP1P78357 1384 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 ADGRA2Q96PE1 1338 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 GPR75-ASB3A0A0A6YYF3 556 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 ZBTB43O43298 467 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 IARSP41252 1262 aaKnown RBP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 PRCPP42785 496 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 JAM2P57087 298 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 GPSM2P81274 684 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 BYSLQ13895 437 aaKnown RBP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 TTC39AQ5SRH9 613 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 ZNF658Q5TYW1 1059 aaPredicted RBP8.92□□□□□ -0.98
CNOT4-201ENST00000315544 TBC1D16Q8TBP0 767 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 PARD6BQ9BYG5 372 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 LRRC4CQ9HCJ2 640 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 BARHL2Q9NY43 387 aa8.92□□□□□ -0.98
CNOT4-201ENST00000315544 GRB10Q13322 594 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 WWC2Q6AWC2 1192 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 SLFN11Q7Z7L1 901 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 CEP57L1Q8IYX8 460 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 CMTR1Q8N1G2 835 aaKnown RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 NOA1Q8NC60 698 aaKnown RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 SYTL4Q96C24 671 aaPredicted RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 VIPAS39Q9H9C1 493 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 ANKRD18BA2A2Z9 1011 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 EPB41P11171 864 aaKnown RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 NCLP19338 710 aaKnown RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 CDC25AP30304 524 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 SYT10Q6XYQ8 523 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 SDR42E1Q8WUS8 393 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 FERMT2Q96AC1 680 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 KRT23Q9C075 422 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 LACRTQ9GZZ8 138 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 SUGT1Q9Y2Z0 365 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 FAM155AB1AL88 458 aaPredicted RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 FXR2P51116 673 aaKnown RBP eCLIP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 DACT2Q5SW24 774 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 DGKHQ86XP1 1220 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
CNOT4-201ENST00000315544 CHP1Q99653 195 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 ABCB6Q9NP58 842 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 LCMT1Q9UIC8 334 aa8.91□□□□□ -0.98
CNOT4-201ENST00000315544 TESPA1A2RU30 521 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-201ENST00000315544 H0YIN7 160 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 ORC2Q13416 577 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-201ENST00000315544 CCDC57Q2TAC2 916 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 LDHAL6AQ6ZMR3 332 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 LRRC57Q8N9N7 239 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 RAI14Q9P0K7 980 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 LEMD3Q9Y2U8 911 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 KIF2AO00139 706 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-201ENST00000315544 POLR2DO15514 142 aaKnown RBP8.9□□□□□ -0.98
CNOT4-201ENST00000315544 MYL1P05976 194 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 CYP2D6P10635 497 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 KCNK18Q7Z418 384 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 GPR161Q8N6U8 529 aaKnown RBP8.9□□□□□ -0.98
CNOT4-201ENST00000315544 KCNMB3Q9NPA1 279 aa8.9□□□□□ -0.98
CNOT4-201ENST00000315544 TNRC18O15417 2968 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-201ENST00000315544 DNAH12Q6ZR08 3092 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 NFIL3Q16649 462 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 ARSHQ5FYA8 562 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 SMARCE1Q969G3 411 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 PKNOX2Q96KN3 472 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 ARHGAP20Q9P2F6 1191 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 MYO1AQ9UBC5 1043 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 NFE2L3Q9Y4A8 694 aa8.9□□□□□ -0.99
CNOT4-201ENST00000315544 CCDC151A5D8V7 595 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 LGALS16A8MUM7 142 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 HDLBPQ00341 1268 aaKnown RBP8.89□□□□□ -0.99
CNOT4-201ENST00000315544 RASSF7Q02833 373 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 SPECC1Q5M775 1068 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 TRIM5Q9C035 493 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 DISC1Q9NRI5 854 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 TRIM10Q9UDY6 481 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 TARSL2A2RTX5 802 aaKnown RBP8.89□□□□□ -0.99
CNOT4-201ENST00000315544 N4BP1O75113 896 aaKnown RBP8.89□□□□□ -0.99
CNOT4-201ENST00000315544 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-201ENST00000315544 AGBL3Q8NEM8 1001 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 LMO3Q8TAP4 145 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 CCDC51Q96ER9 411 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 GANQ9H2C0 597 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 NOP2P46087 812 aaKnown RBP8.89□□□□□ -0.99
CNOT4-201ENST00000315544 FNTAP49354 379 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 JAG1P78504 1218 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 DRC7Q8IY82 874 aa8.89□□□□□ -0.99
CNOT4-201ENST00000315544 GLIS3Q8NEA6 775 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms