RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 LRRC8AQ8IWT6 810 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 PLEKHG4BQ96PX9 1271 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 MYH8P13535 1937 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 CCDC69A6NI79 296 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 ICA1Q05084 483 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 SSRP1Q08945 709 aaKnown RBP10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 STK38Q15208 465 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 PRR5LQ6MZQ0 368 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 PROM2Q8N271 834 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 FUT8Q9BYC5 575 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 FOXP1Q9H334 677 aaPredicted RBP10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 JAG2Q9Y219 1238 aa10.65□□□□□ -0.7
RBFOX1-201ENST00000311745 USP17L12C9JPN9 530 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 USP17L21D6R901 530 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 GYS1P13807 737 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CDC25CP30307 473 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 HIBADHP31937 336 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CDR1P51861 262 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 MYBPC2Q14324 1141 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 SRBD1Q8N5C6 995 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 NLRP3Q96P20 1036 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 RANBP17Q9H2T7 1088 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 FAM204AQ9H8W3 233 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 MINDY4BA8MYZ0 360 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 ATP6V1G1O75348 118 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 KIAA0754O94854 1291 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 NEFHP12036 1026 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 PDE4BQ07343 736 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 C16orf87Q6PH81 154 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 USP49Q70CQ1 688 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 LMBR1Q8WVP7 490 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 IQCGQ9H095 443 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 SAMM50Q9Y512 469 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 BAZ2BQ9UIF8 2168 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CD151P48509 253 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CCZ1BP86790 482 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CCZ1P86791 482 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 DDR1Q08345 913 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 GRAPQ13588 217 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CAVIN4Q5BKX8 364 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 CCDC73Q6ZRK6 1079 aa10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 GRAPLQ8TC17 118 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 MMADHCQ9H3L0 296 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-201ENST00000311745 hCG_1642624A0A1W2PR95 340 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 KLRG2A4D1S0 409 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 M0R2N6 131 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 ZNF189O75820 626 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 PTPREP23469 700 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 NLRP12P59046 1061 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 GPSM2P81274 684 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 TMEM62Q0P6H9 643 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 PNOCQ13519 176 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 IL17AQ16552 155 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 NT5DC1Q5TFE4 455 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 TMEM110Q86TL2 294 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 TAX1BP1Q86VP1 789 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 EXOC8Q8IYI6 725 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 AOPEPQ8N6M6 819 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 ARPC5LQ9BPX5 153 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 RNF26Q9BY78 433 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 A1CFQ9NQ94 594 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 PRPF3O43395 683 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 DEXIO95424 95 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 GNPTABQ3T906 1256 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 SPTY2D1Q68D10 685 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 ELOA2Q8IYF1 753 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 SPATA20Q8TB22 786 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 RTFDC1Q9BY42 306 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 PARD6BQ9BYG5 372 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 ANKRD2Q9GZV1 360 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 AFF2P51816 1311 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 SCN9AQ15858 1988 aa10.63□□□□□ -0.71
RBFOX1-201ENST00000311745 ACTN4O43707 911 aaKnown RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 RPS6KA5O75582 802 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 IMPDH2P12268 514 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 SPECC1Q5M775 1068 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 RNF41Q9H4P4 317 aaPredicted RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 ZSCAN9O15535 394 aaPredicted RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 ZPR1O75312 459 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 CAPRIN2Q6IMN6 1127 aaKnown RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 SAPCD2Q86UD0 394 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 CCDC82Q8N4S0 544 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 EIF4E1BA6NMX2 242 aaKnown RBP10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 CUTAO60888 179 aa10.62□□□□□ -0.71
RBFOX1-201ENST00000311745 RNF187Q5TA31 235 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms