RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 ZHX2Q9Y6X8 837 aa6.61□□□□□ -1.35
TTC39C-201ENST00000304621 SMCHD1A6NHR9 2005 aa6.61□□□□□ -1.35
TTC39C-201ENST00000304621 A0A1W2PQ27 194 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 A0A1W2PQ64 194 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 A0A1W2PQD8 194 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 FSD2A1L4K1 749 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 GOLGA6L4A6NEF3 574 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L15C9J2P7 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L13C9JLJ4 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L11C9JVI0 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L18D6R9N7 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L22D6RA61 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L17D6RBQ6 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L19D6RCP7 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L20D6RJB6 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 hCG_1984214I3L0E3 225 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 TRAF5O00463 557 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 VCAM1P19320 739 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 PTPREP23469 700 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 ZNF445P59923 1031 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L24Q0WX57 530 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 SUPT20HL1Q3ZLR7 823 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 CCDC183Q5T5S1 534 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 GALNT17Q6IS24 598 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 PPP1R18Q6NYC8 613 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 USP17L6PQ6QN14 398 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 FBXO11Q86XK2 927 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 FMR1NBQ8N0W7 255 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 ZNF713Q8N859 430 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 TBC1D5Q92609 795 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 TMEM60Q9H2L4 133 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 SH2D4AQ9H788 454 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 GINM1Q9NU53 330 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 ZNF536O15090 1300 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 RLFQ13129 1914 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 CCDC194A0A1B0GVG4 234 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 MEIS2O14770 477 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 PLA2G6O60733 806 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 PFKFB1P16118 471 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 HMGCS2P54868 508 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 BACE1P56817 501 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 PTGDRQ13258 359 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 TMEM132AQ24JP5 1023 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 RESP18Q5W5W9 173 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 MAP1SQ66K74 1059 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 KRT25Q7Z3Z0 450 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 FAM177A1Q8N128 213 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 REXO1Q8N1G1 1221 aaKnown RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 ZNF280CQ8ND82 737 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 TBCKQ8TEA7 893 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 CCDC12Q8WUD4 166 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 MRPS27Q92552 414 aaKnown RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 HOOK2Q96ED9 719 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 CSRNP2Q9H175 543 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 CLSTN2Q9H4D0 955 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 RPAP3Q9H6T3 665 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 NOL7Q9UMY1 257 aaKnown RBP6.6□□□□□ -1.35
TTC39C-201ENST00000304621 HPSEQ9Y251 543 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 AFG3L2Q9Y4W6 797 aa6.6□□□□□ -1.35
TTC39C-201ENST00000304621 A0A087X0B3 334 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 WDR46O15213 610 aaKnown RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 CUTAO60888 179 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 CMA1P23946 247 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 GNA11P29992 359 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 HOXA13P31271 388 aaPredicted RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 MAP3K9P80192 1104 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 ATP2C1P98194 919 aaPredicted RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 NONOQ15233 471 aaKnown RBP eCLIP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 POTEEQ6S8J3 1075 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 KRI1Q8N9T8 703 aaKnown RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 ZC3H15Q8WU90 426 aaKnown RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 ERCC4Q92889 916 aaPredicted RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 FUCA2Q9BTY2 467 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 AMNQ9BXJ7 453 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 PSTPIP2Q9H939 334 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 ELP3Q9H9T3 547 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 RRAGCQ9HB90 399 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 FEM1BQ9UK73 627 aa6.59□□□□□ -1.35
TTC39C-201ENST00000304621 SRPRBQ9Y5M8 271 aaKnown RBP6.59□□□□□ -1.35
TTC39C-201ENST00000304621 A0A087WWV3 80 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 FAM237AA0A1B0GTK4 181 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 SLC37A4O43826 429 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 TDP2O95551 362 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 CHRM1P11229 460 aaPredicted RBP6.59□□□□□ -1.36
TTC39C-201ENST00000304621 DEKP35659 375 aaKnown RBP6.59□□□□□ -1.36
TTC39C-201ENST00000304621 TRAPPC10P48553 1259 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 FAM160A1Q05DH4 1040 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 LETM2Q2VYF4 491 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 LRSAM1Q6UWE0 723 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 FAM160B2Q86V87 743 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 CKAP2LQ8IYA6 745 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 CHURC1Q8WUH1 139 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 LPAR1Q92633 364 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 CUL5Q93034 780 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 EPSTI1Q96J88 318 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 C12orf42Q96LP6 360 aa6.59□□□□□ -1.36
TTC39C-201ENST00000304621 SLF1Q9BQI6 1058 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms