RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 HACL1Q9UJ83 578 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 TUBE1Q9UJT0 475 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 PPP1R11O60927 126 aaPredicted RBP16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 EGFRP00533 1210 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 ELOA2Q8IYF1 753 aaPredicted RBP16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 DACH1Q9UI36 760 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 ESPNB1AK53 854 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 STAT6P42226 847 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 TRAF1Q13077 416 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 IQCB1Q15051 598 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 SPC24Q8NBT2 197 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 TMEM266Q2M3C6 531 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 HS1BP3Q53T59 392 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 MTMR8Q96EF0 704 aa16.43■□□□□ 0.22
SHCBP1-201ENST00000303383 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 KCNA4P22459 653 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 CDC25AP30304 524 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 LMNB1P20700 586 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 PRPHP41219 470 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 CALCRLQ16602 461 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 C4orf32Q8N8J7 132 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 RAB34Q9BZG1 259 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.42■□□□□ 0.22
SHCBP1-201ENST00000303383 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 TXKP42681 527 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 ZNF341Q9BYN7 854 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
SHCBP1-201ENST00000303383 A0A087X0B3 334 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 KARSQ15046 597 aaKnown RBP16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 IL17AQ16552 155 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 CCDC84Q86UT8 332 aaPredicted RBP16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 DHX40Q8IX18 779 aaKnown RBP16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 TECP42680 631 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 STAMQ92783 540 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 NAP1L4Q99733 375 aaKnown RBP16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 CCDC174Q6PII3 467 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 AK8Q96MA6 479 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 BPIFA3Q9BQP9 254 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
SHCBP1-201ENST00000303383 PRELPP51888 382 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 APOBEC3FQ8IUX4 373 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 CDK5RAP3Q96JB5 506 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 PLIN2Q99541 437 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 ASTN2O75129 1339 aaPredicted RBP16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 AP5Z1O43299 807 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 TDP2O95551 362 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 ANGEL2Q5VTE6 544 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 CABP7Q86V35 215 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 CALML4Q96GE6 196 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 MCTP2Q6DN12 878 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 BTNL9Q6UXG8 535 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 DISC1Q9NRI5 854 aa16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 DDX25Q9UHL0 483 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 CTDP1Q9Y5B0 961 aaPredicted RBP16.39■□□□□ 0.21
SHCBP1-201ENST00000303383 PP2D1A8MPX8 630 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 ZNF75DP51815 510 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 MLKLQ8NB16 471 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 ANO3Q9BYT9 981 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 MYL5Q02045 173 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 GPC2Q8N158 579 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 GCFC2P16383 781 aaKnown RBP16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 LRWD1Q9UFC0 647 aa16.38■□□□□ 0.21
SHCBP1-201ENST00000303383 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 BLZF1Q9H2G9 400 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms