RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 NEK8Q86SG6 692 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 TBCKQ8TEA7 893 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 SRPRBQ9Y5M8 271 aaKnown RBP14.81□□□□□ -0.04
CCDC7-202ENST00000302316 C19orf81C9J6K1 198 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 FLOT1O75955 427 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 POTEJP0CG39 1038 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 NDUFA8P51970 172 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 ATP2C1P98194 919 aaPredicted RBP14.8□□□□□ -0.04
CCDC7-202ENST00000302316 PTGDRQ13258 359 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 LETM2Q2VYF4 491 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 SHC4Q6S5L8 630 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 PRPF38AQ8NAV1 312 aaKnown RBP14.8□□□□□ -0.04
CCDC7-202ENST00000302316 C12orf42Q96LP6 360 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 TMOD4Q9NZQ9 345 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 AFG3L2Q9Y4W6 797 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L15C9J2P7 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L13C9JLJ4 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L11C9JVI0 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L18D6R9N7 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L22D6RA61 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L17D6RBQ6 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L19D6RCP7 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L20D6RJB6 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 KINO60870 393 aaKnown RBP14.8□□□□□ -0.04
CCDC7-202ENST00000302316 LETM1O95202 739 aaPredicted RBP14.8□□□□□ -0.04
CCDC7-202ENST00000302316 PFKFB1P16118 471 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 GRIN1Q05586 938 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L24Q0WX57 530 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 SNW1Q13573 536 aaKnown RBP14.8□□□□□ -0.04
CCDC7-202ENST00000302316 RESP18Q5W5W9 173 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 USP17L6PQ6QN14 398 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 ANKRD13AQ8IZ07 590 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 ENGASEQ8NFI3 743 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 CLSTN2Q9H4D0 955 aa14.8□□□□□ -0.04
CCDC7-202ENST00000302316 CCNT1O60563 726 aaKnown RBP14.79□□□□□ -0.04
CCDC7-202ENST00000302316 CAMK4Q16566 473 aa14.79□□□□□ -0.04
CCDC7-202ENST00000302316 MAP1SQ66K74 1059 aaPredicted RBP14.79□□□□□ -0.04
CCDC7-202ENST00000302316 MOB2Q70IA6 237 aa14.79□□□□□ -0.04
CCDC7-202ENST00000302316 FERMT2Q96AC1 680 aa14.79□□□□□ -0.04
CCDC7-202ENST00000302316 TNMDQ9H2S6 317 aa14.79□□□□□ -0.04
CCDC7-202ENST00000302316 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
CCDC7-202ENST00000302316 PPP1R9AQ9ULJ8 1098 aa14.79□□□□□ -0.04
CCDC7-202ENST00000302316 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
CCDC7-202ENST00000302316 RBM46Q8TBY0 533 aaKnown RBP14.78□□□□□ -0.04
CCDC7-202ENST00000302316 RRAGCQ9HB90 399 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 MEIS2O14770 477 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 AP3B2Q13367 1082 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 SPECC1Q5M775 1068 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 LRSAM1Q6UWE0 723 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 ARMC9Q7Z3E5 817 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
CCDC7-202ENST00000302316 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 CLMNQ96JQ2 1002 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 CSRNP2Q9H175 543 aa14.78□□□□□ -0.04
CCDC7-202ENST00000302316 ABCB11O95342 1321 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 VWA3AA6NCI4 1184 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 GOLGA6L3A6NEY3 463 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 OPLAHO14841 1288 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 ICAM1P05362 532 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 MAP3K11Q16584 847 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 LDHDQ86WU2 507 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 ANO3Q9BYT9 981 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 SLC38A10Q9HBR0 1119 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 FAM13BQ9NYF5 915 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 CCPG1Q9ULG6 757 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 HPSEQ9Y251 543 aa14.77□□□□□ -0.04
CCDC7-202ENST00000302316 MRPL11Q9Y3B7 192 aaKnown RBP14.77□□□□□ -0.04
CCDC7-202ENST00000302316 CTDP1Q9Y5B0 961 aaPredicted RBP14.77□□□□□ -0.04
CCDC7-202ENST00000302316 FAM237AA0A1B0GTK4 181 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 NEMFO60524 1076 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 SYKP43405 635 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.05
CCDC7-202ENST00000302316 SH3D19Q5HYK7 790 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 ARL6IP4Q66PJ3 421 aaKnown RBP14.77□□□□□ -0.05
CCDC7-202ENST00000302316 MCTP2Q6DN12 878 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 GAS2L3Q86XJ1 694 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 ERO1BQ86YB8 467 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 C4orf32Q8N8J7 132 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 OTUD5Q96G74 571 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 ZNF408Q9H9D4 720 aa14.77□□□□□ -0.05
CCDC7-202ENST00000302316 ZNF536O15090 1300 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 SPDYE3A6NKU9 549 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 TRAF5O00463 557 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 LAD1O00515 517 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 ZBED4O75132 1171 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 PPATQ06203 517 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 ATG4CQ96DT6 458 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 AGBL1Q96MI9 1066 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 PARP14Q460N5 1801 aa14.76□□□□□ -0.05
CCDC7-202ENST00000302316 SPDYE5A6NIY4 337 aa14.75□□□□□ -0.05
CCDC7-202ENST00000302316 ZNF202O95125 648 aa14.75□□□□□ -0.05
CCDC7-202ENST00000302316 CFBP00751 764 aa14.75□□□□□ -0.05
CCDC7-202ENST00000302316 FDX1P10109 184 aa14.75□□□□□ -0.05
CCDC7-202ENST00000302316 HOXA13P31271 388 aaPredicted RBP14.75□□□□□ -0.05
CCDC7-202ENST00000302316 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
CCDC7-202ENST00000302316 RAVER2Q9HCJ3 691 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms