RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SPATA5Q8NB90 893 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 TRIM58Q8NG06 486 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 CACTINQ8WUQ7 758 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 VCX3AQ9NNX9 186 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 GYG1P46976 350 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 SNAP25P60880 206 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 CYP27A1Q02318 531 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 HIBCHQ6NVY1 386 aaPredicted RBP13.5□□□□□ -0.25
ABCA3-201ENST00000301732 EFCAB8A8MWE9 144 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 USP17L21D6R901 530 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 PI4K2BG5E9Z4 385 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
ABCA3-201ENST00000301732 PDE1BQ01064 536 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 NSMCE1Q8WV22 266 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 TMEM87BQ96K49 555 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 HEXIM1O94992 359 aaKnown RBP13.5□□□□□ -0.25
ABCA3-201ENST00000301732 RAPGEF5Q92565 580 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 HOMER3Q9NSC5 361 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 SNAPC4Q5SXM2 1469 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 BNIP3LO60238 219 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 GAS7O60861 476 aa13.5□□□□□ -0.25
ABCA3-201ENST00000301732 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
ABCA3-201ENST00000301732 EPN1Q9Y6I3 576 aaPredicted RBP13.5□□□□□ -0.25
ABCA3-201ENST00000301732 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
ABCA3-201ENST00000301732 CCDC197Q8NCU1 140 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 SPATS2LQ9NUQ6 558 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 SUFUQ9UMX1 484 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 RPN1P04843 607 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 ETF1P62495 437 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 ADAM9Q13443 819 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 MYOCDQ8IZQ8 938 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 ANKRD35Q8N283 1001 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 FAM133AQ8N9E0 248 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 KLHL29Q96CT2 875 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 BRD1O95696 1058 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 CNGA1P29973 690 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 RINLQ6ZS11 566 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 DENND2AQ9ULE3 1009 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 ACSL3O95573 720 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 ALAS1P13196 640 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 DAB2P98082 770 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 SCRN1Q12765 414 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 REXO1Q8N1G1 1221 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 AZI2Q9H6S1 392 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 EXOC7Q9UPT5 735 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 CCDC195A0A1B0GUA6 201 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 TCP10L2B9ZVM9 353 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 PTGDRQ13258 359 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 XKR9Q5GH70 373 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 SAMSN1Q9NSI8 373 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 MTMR6Q9Y217 621 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 GOLGA8MH3BSY2 632 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 KRT14P02533 472 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 CASP1P29466 404 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 BCAMP50895 628 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 NNTQ13423 1086 aa13.49□□□□□ -0.25
ABCA3-201ENST00000301732 CNOT6LQ96LI5 555 aaKnown RBP13.49□□□□□ -0.25
ABCA3-201ENST00000301732 KRT3P12035 628 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 LIG4P49917 911 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 CLCN6P51797 869 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 ASPHQ12797 758 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 CCNYQ8ND76 341 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 CCDC138Q96M89 665 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 TRIM56Q9BRZ2 755 aaKnown RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 SOX11P35716 441 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 PRPF31Q8WWY3 499 aaKnown RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 PPP1R36Q96LQ0 422 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 BAG5Q9UL15 447 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 INHBAP08476 426 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 PMS1P54277 932 aaKnown RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 DEPTORQ8TB45 409 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 MAP3K5Q99683 1374 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 GPC4O75487 556 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 ACTN1P12814 892 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 PDE6CP51160 858 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 BASP1P80723 227 aaKnown RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 PPARAQ07869 468 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 POLA2Q14181 598 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 GRAMD1BQ3KR37 738 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
ABCA3-201ENST00000301732 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
ABCA3-201ENST00000301732 ANGPTL8Q6UXH0 198 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms