RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 USP17L15C9J2P7 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L13C9JLJ4 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L11C9JVI0 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L18D6R9N7 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L22D6RA61 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L17D6RBQ6 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L19D6RCP7 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L20D6RJB6 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 CDC45O75419 566 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 SEC24BO95487 1268 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
VWA3A-201ENST00000299840 TFAP4Q01664 338 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 SP3Q02447 781 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 USP17L24Q0WX57 530 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 DGKZQ13574 1117 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 GTF3C2Q8WUA4 911 aaPredicted RBP12.34□□□□□ -0.43
VWA3A-201ENST00000299840 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 ASCC2Q9H1I8 757 aaPredicted RBP12.34□□□□□ -0.43
VWA3A-201ENST00000299840 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
VWA3A-201ENST00000299840 TSPY3P0CV98 308 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 TSPY8P0CW00 308 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 MYBL2P10244 700 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 RWDD2BP57060 319 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 PTH1RQ03431 593 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
VWA3A-201ENST00000299840 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 MFSD6Q6ZSS7 791 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 SH3GL3Q99963 347 aa12.34□□□□□ -0.43
VWA3A-201ENST00000299840 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 CYP2C8P10632 490 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 VCAM1P19320 739 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 COL13A1Q5TAT6 717 aaPredicted RBP12.33□□□□□ -0.44
VWA3A-201ENST00000299840 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 CLEC10AQ8IUN9 316 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
VWA3A-201ENST00000299840 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 PCDHGA4Q9Y5G9 962 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 TTLL1O95922 423 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 HAND2P61296 217 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 TBC1D32Q96NH3 1257 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 ARPC5LQ9BPX5 153 aa12.33□□□□□ -0.44
VWA3A-201ENST00000299840 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
VWA3A-201ENST00000299840 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
VWA3A-201ENST00000299840 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
VWA3A-201ENST00000299840 OATP04181 439 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 NFXL1Q6ZNB6 911 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 CTU1Q7Z7A3 348 aaKnown RBP12.32□□□□□ -0.44
VWA3A-201ENST00000299840 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 ZYXQ15942 572 aaKnown RBP12.32□□□□□ -0.44
VWA3A-201ENST00000299840 P2RX7Q99572 595 aaKnown RBP12.32□□□□□ -0.44
VWA3A-201ENST00000299840 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 CPA4Q9UI42 421 aa12.32□□□□□ -0.44
VWA3A-201ENST00000299840 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 GNRH1P01148 92 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 RPUSD2Q8IZ73 545 aaKnown RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 KCTD17Q8N5Z5 321 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 GMCL1P1Q8NEA9 526 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 ESR2Q92731 530 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 KRT23Q9C075 422 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 RPAP3Q9H6T3 665 aaPredicted RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 HERVK_113P62684 666 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 LACTBP83111 547 aaPredicted RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 TBC1D8BQ0IIM8 1120 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 TBC1D25Q3MII6 688 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 SMCR8Q8TEV9 937 aaPredicted RBP12.31□□□□□ -0.44
VWA3A-201ENST00000299840 TTC14Q96N46 770 aa12.31□□□□□ -0.44
VWA3A-201ENST00000299840 NEDD4P46934 1319 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 CYP21A2P08686 494 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 GPS2Q13227 327 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 CCDC181Q5TID7 509 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
VWA3A-201ENST00000299840 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 CD99L2Q8TCZ2 262 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 SUN2Q9UH99 717 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
VWA3A-201ENST00000299840 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
VWA3A-201ENST00000299840 F5H6K3 240 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 KLRC3Q07444 240 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 COG2Q14746 738 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms