RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SF3A1Q15459 793 aaKnown RBP28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 TREML2Q5T2D2 321 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 GPBP1L1Q9HC44 474 aaPredicted RBP28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 BIN2Q9UBW5 565 aaPredicted RBP28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 VWA5AO00534 786 aa28.18■■■□□ 2.1
GTF2A1-201ENST00000298173 KRT25Q7Z3Z0 450 aa28.18■■■□□ 2.1
GTF2A1-201ENST00000298173 MYPNQ86TC9 1320 aa28.18■■■□□ 2.1
GTF2A1-201ENST00000298173 CCDC194A0A1B0GVG4 234 aa28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 KIF3CO14782 793 aa28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 SAMD1Q6SPF0 538 aaPredicted RBP28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 TEX2Q8IWB9 1127 aa28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 ATG4CQ96DT6 458 aa28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 HOXC10Q9NYD6 342 aa28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 NOL7Q9UMY1 257 aaKnown RBP28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 PCDHB6Q9Y5E3 794 aa28.17■■■□□ 2.1
GTF2A1-201ENST00000298173 MEIS2O14770 477 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 TRAK2O60296 914 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 TAL1P17542 331 aaPredicted RBP28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 REPS2Q8NFH8 660 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 PGBD1Q96JS3 809 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 TMEM260Q9NX78 707 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 COL11A1P12107 1806 aaPredicted RBP28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 WNT7AO00755 349 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 UBE2HP62256 183 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 SKOR2Q2VWA4 1001 aaPredicted RBP28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 JAKMIP3Q5VZ66 844 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 WNK4Q96J92 1243 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 AGBL1Q96MI9 1066 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 PASKQ96RG2 1323 aa28.16■■■□□ 2.1
GTF2A1-201ENST00000298173 ZBED4O75132 1171 aa28.15■■■□□ 2.1
GTF2A1-201ENST00000298173 STK38Q15208 465 aa28.15■■■□□ 2.1
GTF2A1-201ENST00000298173 KCNG4Q8TDN1 519 aa28.15■■■□□ 2.1
GTF2A1-201ENST00000298173 MORC2Q9Y6X9 1032 aaPredicted RBP28.15■■■□□ 2.1
GTF2A1-201ENST00000298173 ABCB11O95342 1321 aa28.15■■■□□ 2.1
GTF2A1-201ENST00000298173 SPTLC2O15270 562 aa28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 NONOQ15233 471 aaKnown RBP eCLIP28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 UBE2SQ16763 222 aa28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 USP17L6PQ6QN14 398 aa28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 GADL1Q6ZQY3 521 aa28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 FASTKD5Q7L8L6 764 aaKnown RBP28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 GPT2Q8TD30 523 aa28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 PNMA2Q9UL42 364 aa28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 MRPL11Q9Y3B7 192 aaKnown RBP28.14■■■□□ 2.1
GTF2A1-201ENST00000298173 SPDYE16A6NNV3 312 aaPredicted RBP28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 PIK3CDO00329 1044 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 SNAPC2Q13487 334 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 INF2Q27J81 1249 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 RAVER2Q9HCJ3 691 aaKnown RBP28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 CCPG1Q9ULG6 757 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 AGTPBP1Q9UPW5 1226 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 ATP2A1O14983 1001 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 PPP6R2O75170 966 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 ATP2B1P20020 1258 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 OAZ1P54368 228 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 TTC38Q5R3I4 469 aa28.13■■■□□ 2.09
GTF2A1-201ENST00000298173 EDIL3O43854 480 aa28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 KLHL40Q2TBA0 621 aa28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 GPAT2Q6NUI2 795 aa28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 CPXCR1Q8N123 301 aa28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 MS4A4AQ96JQ5 239 aa28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 PCDHA7Q9UN72 937 aa28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 DDX49Q9Y6V7 483 aaKnown RBP28.12■■■□□ 2.09
GTF2A1-201ENST00000298173 MCTP2Q6DN12 878 aa28.11■■■□□ 2.09
GTF2A1-201ENST00000298173 POTEEQ6S8J3 1075 aa28.11■■■□□ 2.09
GTF2A1-201ENST00000298173 TBCKQ8TEA7 893 aa28.11■■■□□ 2.09
GTF2A1-201ENST00000298173 P2RX7Q99572 595 aaKnown RBP28.11■■■□□ 2.09
GTF2A1-201ENST00000298173 ZNF214Q9UL59 606 aaPredicted RBP28.11■■■□□ 2.09
GTF2A1-201ENST00000298173 AP3B2Q13367 1082 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 CLEC4DQ8WXI8 215 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 TBC1D5Q92609 795 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 CEP131Q9UPN4 1083 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 GHRHRQ02643 423 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 TMEM132BQ14DG7 1078 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 ZNF174Q15697 407 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 SPRYD7Q5W111 196 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 ADALQ6DHV7 355 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 LBX2Q6XYB7 198 aa28.1■■■□□ 2.09
GTF2A1-201ENST00000298173 MYH7BA7E2Y1 1941 aa28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 BMP15O95972 392 aa28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 MBD3O95983 291 aa28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 ZBTB48P10074 688 aaPredicted RBP28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 AXDND1Q5T1B0 1012 aaPredicted RBP28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 NEK8Q86SG6 692 aa28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 CTDP1Q9Y5B0 961 aaPredicted RBP28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 A0A0G2JMZ2 1700 aa28.09■■■□□ 2.09
GTF2A1-201ENST00000298173 FOSP01100 380 aaPredicted RBP28.08■■■□□ 2.09
GTF2A1-201ENST00000298173 MARCKSP29966 332 aaPredicted RBP28.08■■■□□ 2.09
GTF2A1-201ENST00000298173 ME1P48163 572 aa28.08■■■□□ 2.09
GTF2A1-201ENST00000298173 HUNKP57058 714 aa28.08■■■□□ 2.09
GTF2A1-201ENST00000298173 C4orf32Q8N8J7 132 aa28.08■■■□□ 2.09
GTF2A1-201ENST00000298173 ASCC2Q9H1I8 757 aaPredicted RBP28.08■■■□□ 2.09
GTF2A1-201ENST00000298173 GTF2A2P52657 109 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 JMYQ8N9B5 988 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 SMC1BQ8NDV3 1235 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 CRYGNQ8WXF5 182 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 CETPP11597 493 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 ALAS1P13196 640 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 SAPCD2Q86UD0 394 aa28.07■■■□□ 2.08
GTF2A1-201ENST00000298173 RIPK3Q9Y572 518 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms