RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CBX8Q9HC52 389 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 HAUS2Q9NVX0 235 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 STIM2Q9P246 746 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 KIAA1024Q9UPX6 916 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 MED14O60244 1454 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZBTB24O43167 697 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 KIAA1468Q9P260 1216 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 CEP152O94986 1710 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 ARHGAP44Q17R89 818 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 SH3RF3Q8TEJ3 882 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 RPS6KC1Q96S38 1066 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 PRDM10Q9NQV6 1147 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 SETBP1Q9Y6X0 1596 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 E7EVH7 732 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 POLR3GO15318 223 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 HS1BP3Q53T59 392 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 ABI1Q8IZP0 508 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 ODR4Q5SWX8 454 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 EP400NLQ6ZTU2 488 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 NSMCE1Q8WV22 266 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 CACNB3P54284 484 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 CDC37Q16543 378 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 FBXO40Q9UH90 709 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 C1orf112Q9NSG2 853 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 WDR70Q9NW82 654 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 GADD45BO75293 160 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 WRNIP1Q96S55 665 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 HOXC10Q9NYD6 342 aa19.54■□□□□ 0.72
CDC42EP3-201ENST00000295324 STAT1P42224 750 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 TBCKQ8TEA7 893 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZNF215Q9UL58 517 aaPredicted RBP19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 TRMT44Q8IYL2 757 aaKnown RBP19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 CROCC2H7BZ55 1655 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 PRPF3O43395 683 aaKnown RBP19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 OPA1O60313 960 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 CEP128Q6ZU80 1094 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 DCAF4Q8WV16 495 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 COA7Q96BR5 231 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 AKT3Q9Y243 479 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 KRBA2Q6ZNG9 492 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 IMPACTQ9P2X3 320 aa19.53■□□□□ 0.72
CDC42EP3-201ENST00000295324 MARCH10Q8NA82 808 aaPredicted RBP19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 GABPB2Q8TAK5 448 aaPredicted RBP19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 NACC1Q96RE7 527 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 LAMC1P11047 1609 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 CPDO75976 1380 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 GPSM2P81274 684 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 GPR161Q8N6U8 529 aaKnown RBP19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 CCDC63Q8NA47 563 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 USP17L5A8MUK1 530 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZNF365Q70YC5 407 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 SYMPKQ92797 1274 aaKnown RBP19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 MMS19Q96T76 1030 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 FAM207AQ9NSI2 230 aaPredicted RBP19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 HESX1Q9UBX0 185 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZHX2Q9Y6X8 837 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 TERF1P54274 439 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 LRMPQ12912 555 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 ANO3Q9BYT9 981 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 MIS12Q9H081 205 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 ST7Q9NRC1 585 aa19.52■□□□□ 0.72
CDC42EP3-201ENST00000295324 PNPLA6Q8IY17 1366 aa19.52■□□□□ 0.71
CDC42EP3-201ENST00000295324 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.71
CDC42EP3-201ENST00000295324 SYT10Q6XYQ8 523 aa19.52■□□□□ 0.71
CDC42EP3-201ENST00000295324 CCDC25Q86WR0 208 aa19.52■□□□□ 0.71
CDC42EP3-201ENST00000295324 SPATA31A5Q5VU36 1347 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 SPATA31A7Q8IWB4 1347 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 MED10Q9BTT4 135 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 GBP6Q6ZN66 633 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 SIRT2Q8IXJ6 389 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 RASGRP4Q8TDF6 673 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 POMGNT1Q8WZA1 660 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 PCDHA7Q9UN72 937 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 HNRNPDLO14979 420 aaKnown RBP19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 CYP2E1P05181 493 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 GAP43P17677 238 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 CFAP58Q5T655 872 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 LARP4BQ92615 738 aaKnown RBP19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 MROH7-TTC4A0A0A0MT08 1334 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 SNAP23O00161 211 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 ABCD1P33897 745 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 PI4K2BQ8TCG2 481 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 NLRC4Q9NPP4 1024 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 SUGT1Q9Y2Z0 365 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 NUB1Q9Y5A7 615 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 SETD1BQ9UPS6 1966 aaKnown RBP19.51■□□□□ 0.71
CDC42EP3-201ENST00000295324 RASA3Q14644 834 aa19.5■□□□□ 0.71
CDC42EP3-201ENST00000295324 SYCE1Q8N0S2 351 aa19.5■□□□□ 0.71
CDC42EP3-201ENST00000295324 SECISBP2LQ93073 1101 aaKnown RBP19.5■□□□□ 0.71
CDC42EP3-201ENST00000295324 CALCOCO1Q9P1Z2 691 aa19.5■□□□□ 0.71
CDC42EP3-201ENST00000295324 USTQ9Y2C2 406 aa19.5■□□□□ 0.71
CDC42EP3-201ENST00000295324 DLC1Q96QB1 1528 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms