RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MOXD2PA6NHM9 499 aa29.73■■■□□ 2.35
U2AF1-201ENST00000291552 PQBP1O60828 265 aaKnown RBP29.73■■■□□ 2.35
U2AF1-201ENST00000291552 CLTBP09497 229 aa29.73■■■□□ 2.35
U2AF1-201ENST00000291552 PCP11498 1178 aaKnown RBP29.73■■■□□ 2.35
U2AF1-201ENST00000291552 MFAP1P55081 439 aaKnown RBP29.73■■■□□ 2.35
U2AF1-201ENST00000291552 GJA9P57773 515 aa29.73■■■□□ 2.35
U2AF1-201ENST00000291552 C9orf50Q5SZB4 431 aa29.73■■■□□ 2.35
U2AF1-201ENST00000291552 PURBQ96QR8 312 aaKnown RBP29.73■■■□□ 2.35
U2AF1-201ENST00000291552 STARD7Q9NQZ5 370 aa29.73■■■□□ 2.35
U2AF1-201ENST00000291552 C6orf222P0C671 652 aaPredicted RBP29.72■■■□□ 2.35
U2AF1-201ENST00000291552 KIAA0355O15063 1070 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 SNHG28P0DPA3 235 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 PTGS1P23219 599 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 SHHQ15465 462 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 ANKRD33Q7Z3H0 272 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 IL25Q9H293 177 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 DIAPH3Q9NSV4 1193 aa29.71■■■□□ 2.35
U2AF1-201ENST00000291552 ASB14A6NK59 587 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 PDE4AP27815 886 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 NKX3-2P78367 333 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 ZNF543Q08ER8 600 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 NSMFQ6X4W1 530 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 ZKSCAN3Q9BRR0 538 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 RNF41Q9H4P4 317 aaPredicted RBP29.7■■■□□ 2.35
U2AF1-201ENST00000291552 MTMR10Q9NXD2 777 aa29.7■■■□□ 2.35
U2AF1-201ENST00000291552 SUPT16HQ9Y5B9 1047 aaKnown RBP29.7■■■□□ 2.35
U2AF1-201ENST00000291552 MYH6P13533 1939 aa29.7■■■□□ 2.34
U2AF1-201ENST00000291552 NFIBO00712 420 aa29.69■■■□□ 2.34
U2AF1-201ENST00000291552 ASGR1P07306 291 aa29.69■■■□□ 2.34
U2AF1-201ENST00000291552 FAAP100Q0VG06 881 aa29.69■■■□□ 2.34
U2AF1-201ENST00000291552 NUP133Q8WUM0 1156 aa29.69■■■□□ 2.34
U2AF1-201ENST00000291552 TTC14Q96N46 770 aa29.69■■■□□ 2.34
U2AF1-201ENST00000291552 EPHB4P54760 987 aa29.68■■■□□ 2.34
U2AF1-201ENST00000291552 FBXO16Q8IX29 292 aaPredicted RBP29.68■■■□□ 2.34
U2AF1-201ENST00000291552 ESR2Q92731 530 aa29.68■■■□□ 2.34
U2AF1-201ENST00000291552 TOX2Q96NM4 488 aa29.68■■■□□ 2.34
U2AF1-201ENST00000291552 PDGFCQ9NRA1 345 aa29.68■■■□□ 2.34
U2AF1-201ENST00000291552 GNEQ9Y223 722 aaKnown RBP29.68■■■□□ 2.34
U2AF1-201ENST00000291552 ZNF213O14771 459 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 TNFAIP2Q03169 654 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 BAATQ14032 418 aaPredicted RBP29.67■■■□□ 2.34
U2AF1-201ENST00000291552 TMEM63BQ5T3F8 832 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 TAPT1Q6NXT6 567 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 PCSK9Q8NBP7 692 aaKnown RBP29.67■■■□□ 2.34
U2AF1-201ENST00000291552 MORC4Q8TE76 937 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 DSCC1Q9BVC3 393 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 ELP1O95163 1332 aa29.67■■■□□ 2.34
U2AF1-201ENST00000291552 CDK7P50613 346 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 BEX3Q00994 111 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 GNASQ5JWF2 1037 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 EEPD1Q7L9B9 569 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 CLEC4DQ8WXI8 215 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 GLT1D1Q96MS3 346 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 SPC25Q9HBM1 224 aa29.66■■■□□ 2.34
U2AF1-201ENST00000291552 HIP1O00291 1037 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 KDM4AO75164 1064 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 GSPT1P15170 499 aaKnown RBP29.65■■■□□ 2.34
U2AF1-201ENST00000291552 SMPD1P17405 629 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 SLC30A10Q6XR72 485 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 CPVLQ9H3G5 476 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 TMEM39AQ9NV64 488 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 TBX21Q9UL17 535 aa29.65■■■□□ 2.34
U2AF1-201ENST00000291552 GOLGA8HP0CJ92 632 aa29.64■■■□□ 2.34
U2AF1-201ENST00000291552 TLK2Q86UE8 772 aa29.64■■■□□ 2.34
U2AF1-201ENST00000291552 DGKHQ86XP1 1220 aa29.64■■■□□ 2.34
U2AF1-201ENST00000291552 DCDC2CA8MYV0 355 aa29.63■■■□□ 2.33
U2AF1-201ENST00000291552 B4E1Z4 1266 aa29.63■■■□□ 2.33
U2AF1-201ENST00000291552 RAG1P15918 1043 aa29.63■■■□□ 2.33
U2AF1-201ENST00000291552 ALDH5A1P51649 535 aaPredicted RBP29.63■■■□□ 2.33
U2AF1-201ENST00000291552 WDR19Q8NEZ3 1342 aa29.63■■■□□ 2.33
U2AF1-201ENST00000291552 A0A0U1RQG5 324 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-201ENST00000291552 NOL8Q76FK4 1167 aaKnown RBP29.62■■■□□ 2.33
U2AF1-201ENST00000291552 VTA1Q9NP79 307 aa29.62■■■□□ 2.33
U2AF1-201ENST00000291552 ARVCFO00192 962 aa29.61■■■□□ 2.33
U2AF1-201ENST00000291552 TTC22Q5TAA0 569 aa29.61■■■□□ 2.33
U2AF1-201ENST00000291552 FAM109BQ6ICB4 259 aaPredicted RBP29.61■■■□□ 2.33
U2AF1-201ENST00000291552 ENAHQ8N8S7 591 aaPredicted RBP29.61■■■□□ 2.33
U2AF1-201ENST00000291552 PNMA1Q8ND90 353 aa29.61■■■□□ 2.33
U2AF1-201ENST00000291552 ANKS1AQ92625 1134 aa29.61■■■□□ 2.33
U2AF1-201ENST00000291552 UBA5Q9GZZ9 404 aa29.61■■■□□ 2.33
U2AF1-201ENST00000291552 PTPDC1A2A3K4 754 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 NT5C2P49902 561 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 IRX6P78412 446 aaPredicted RBP29.6■■■□□ 2.33
U2AF1-201ENST00000291552 FSCN1Q16658 493 aaKnown RBP29.6■■■□□ 2.33
U2AF1-201ENST00000291552 GPATCH4Q5T3I0 446 aaKnown RBP29.6■■■□□ 2.33
U2AF1-201ENST00000291552 CXCL17Q6UXB2 119 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 FAM126BQ8IXS8 530 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 GUCD1Q96NT3 240 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 STXBP5LQ9Y2K9 1186 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 MROH7Q68CQ1 1323 aa29.6■■■□□ 2.33
U2AF1-201ENST00000291552 FPGSQ05932 587 aa29.59■■■□□ 2.33
U2AF1-201ENST00000291552 IQSEC1Q6DN90 963 aa29.59■■■□□ 2.33
U2AF1-201ENST00000291552 IQCA1Q86XH1 822 aa29.59■■■□□ 2.33
U2AF1-201ENST00000291552 SLC43A3Q8NBI5 491 aa29.59■■■□□ 2.33
U2AF1-201ENST00000291552 VTI1AQ96AJ9 217 aa29.59■■■□□ 2.33
U2AF1-201ENST00000291552 ZSCAN10Q96SZ4 725 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-201ENST00000291552 ZSWIM5Q9P217 1185 aa29.59■■■□□ 2.33
U2AF1-201ENST00000291552 GRIN2DO15399 1336 aa29.58■■■□□ 2.33
U2AF1-201ENST00000291552 DYNC1LI2O43237 492 aaPredicted RBP29.58■■■□□ 2.33
U2AF1-201ENST00000291552 TNKSO95271 1327 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms