RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 ELP3Q9H9T3 547 aa11.04□□□□□ -0.64
LRTOMT-201ENST00000289488 GOPCQ9HD26 462 aa11.04□□□□□ -0.64
LRTOMT-201ENST00000289488 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
LRTOMT-201ENST00000289488 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 RBM43Q6ZSC3 357 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 DIS3L2Q8IYB7 885 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 RASGRP4Q8TDF6 673 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 WASF1Q92558 559 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 VCAM1P19320 739 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 STAT2P52630 851 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 BACE1P56817 501 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 CACTINQ8WUQ7 758 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 KIFC2Q96AC6 838 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 ERO1AQ96HE7 468 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 TNMDQ9H2S6 317 aa11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 DDX19AQ9NUU7 478 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 SEC63Q9UGP8 760 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-201ENST00000289488 STXBP3O00186 592 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 NEMFO60524 1076 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 PDIA4P13667 645 aaKnown RBP11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 LIG1P18858 919 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 NF2P35240 595 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 GNL2Q13823 731 aaKnown RBP11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 OTUD5Q96G74 571 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 KIAA1683Q9H0B3 1180 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 BARHL2Q9NY43 387 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 PRR12Q9ULL5 1215 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 AFG3L2Q9Y4W6 797 aa11.02□□□□□ -0.64
LRTOMT-201ENST00000289488 TULP2O00295 520 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 IRF6O14896 467 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 CAMK4Q16566 473 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 QRICH1Q2TAL8 776 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 USH1GQ495M9 461 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 LDHDQ86WU2 507 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 CSADQ9Y600 493 aa11.02□□□□□ -0.65
LRTOMT-201ENST00000289488 VGLL3A8MV65 326 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 ZBTB5O15062 677 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 NAPAP54920 295 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 NLRP5P59047 1200 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 SYDE2Q5VT97 1194 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 ZNF592Q92610 1267 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 USP28Q96RU2 1077 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 CLSTN2Q9H4D0 955 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 SH2D4AQ9H788 454 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 PARP14Q460N5 1801 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 PNMA6FA0A0J9YX94 578 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 WNT7AO00755 349 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 CAVIN2O95810 425 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 PTPN14Q15678 1187 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 NOSTRINQ8IVI9 506 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 CKAP2LQ8IYA6 745 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 MTMR8Q96EF0 704 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 WDR18Q9BV38 432 aa11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 ZSCAN16Q9H4T2 348 aaPredicted RBP11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 RPAP3Q9H6T3 665 aaPredicted RBP11.01□□□□□ -0.65
LRTOMT-201ENST00000289488 RLFQ13129 1914 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 PEX10O60683 326 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 CELF2O95319 508 aaKnown RBP11□□□□□ -0.65
LRTOMT-201ENST00000289488 XBP1P17861 261 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
LRTOMT-201ENST00000289488 CST9Q5W186 159 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 CCDC174Q6PII3 467 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 SARM1Q6SZW1 724 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 LRRC8AQ8IWT6 810 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 DACT1Q9NYF0 836 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 SYNPO2Q9UMS6 1093 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 CLIC4Q9Y696 253 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
LRTOMT-201ENST00000289488 SMCO2A6NFE2 343 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 ERICH4A6NGS2 130 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 FLOT1O75955 427 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
LRTOMT-201ENST00000289488 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
LRTOMT-201ENST00000289488 ZNF165P49910 485 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 TOB1P50616 345 aaPredicted RBP11□□□□□ -0.65
LRTOMT-201ENST00000289488 SAFBQ15424 915 aaKnown RBP eCLIP11□□□□□ -0.65
LRTOMT-201ENST00000289488 ELF2Q15723 593 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 TREML2Q5T2D2 321 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 MYSM1Q5VVJ2 828 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 BTNL9Q6UXG8 535 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 PGBD1Q96JS3 809 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 TSPYL1Q9H0U9 437 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 AS3MTQ9HBK9 375 aa11□□□□□ -0.65
LRTOMT-201ENST00000289488 PCDHA1Q9Y5I3 950 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms