RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 USP14P54578 494 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 DHTKD1Q96HY7 919 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 TTYH3Q9C0H2 523 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 PDGFDQ9GZP0 370 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 KBTBD4Q9NVX7 518 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 PCDHA4Q9UN74 947 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 SBF2Q86WG5 1849 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 A0A1W2PQJ5 194 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 RNF225M0QZC1 329 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 KLRC4O43908 158 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 SRGNP10124 158 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 USP8P40818 1118 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 PRCPP42785 496 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 DNM2P50570 870 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 GSCP56915 257 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 KRT83P78385 493 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 MSL1Q68DK7 614 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 ZNF572Q7Z3I7 529 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 GIMAP8Q8ND71 665 aaPredicted RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 SPATA31A5Q5VU36 1347 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 SPATA31A7Q8IWB4 1347 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 TFRCP02786 760 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 CCT6AP40227 531 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 NLRP5P59047 1200 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 ITIH3Q06033 890 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 CAVIN4Q5BKX8 364 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 DGKHQ86XP1 1220 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 BLIDQ8IZY5 108 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 COG1Q8WTW3 980 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 NSUN4Q96CB9 384 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 TAB2Q9NYJ8 693 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 GNAQP50148 359 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 CKAP4Q07065 602 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 STIM1Q13586 685 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 NAALADL2Q58DX5 795 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 AK8Q96MA6 479 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 CRNKL1Q9BZJ0 848 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 TCP11L1Q9NUJ3 509 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 ZNF652Q9Y2D9 606 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 EBAG9O00559 213 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 UBXN1Q04323 297 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 TTI2Q6NXR4 508 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 FOXR2Q6PJQ5 311 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 GPATCH11Q8N954 259 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 VPS16Q9H269 839 aa11.59□□□□□ -0.55
SKA1-201ENST00000285116 DCP1AQ9NPI6 582 aaPredicted RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 LUC7L2Q9Y383 392 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
SKA1-201ENST00000285116 TAF1P21675 1872 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 CDK5RAP2Q96SN8 1893 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 TTC26A0AVF1 554 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 HNRNPH3P31942 346 aaKnown RBP11.58□□□□□ -0.56
SKA1-201ENST00000285116 STAT6P42226 847 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 HERVK_113P62684 666 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 GRM4Q14833 912 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 WDR59Q6PJI9 974 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 ZSCAN29Q8IWY8 852 aaPredicted RBP11.58□□□□□ -0.56
SKA1-201ENST00000285116 FAM76AQ8TAV0 307 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
SKA1-201ENST00000285116 CRACR2AQ9BSW2 395 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 BLZF1Q9H2G9 400 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 ABCB11O95342 1321 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 ATAD5Q96QE3 1844 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 PSMA7O14818 248 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 DYNLL1P63167 89 aaKnown RBP11.58□□□□□ -0.56
SKA1-201ENST00000285116 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
SKA1-201ENST00000285116 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
SKA1-201ENST00000285116 USP17L12C9JPN9 530 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 USP17L21D6R901 530 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 FAM114A1Q8IWE2 563 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 ERGIC2Q96RQ1 377 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 NIP7Q9Y221 180 aaKnown RBP eCLIP11.57□□□□□ -0.56
SKA1-201ENST00000285116 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
SKA1-201ENST00000285116 FAM169AQ9Y6X4 670 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 BICDL2A1A5D9 508 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 SMIM22K7EJ46 135 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 ABL1P00519 1130 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 PRLRP16471 622 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 MCM7P33993 719 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 GYG1P46976 350 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 IRAK1P51617 712 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 ZBED6P86452 979 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 ARHGAP27Q6ZUM4 889 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 LZTS2Q9BRK4 669 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 TSGA10Q9BZW7 698 aa11.57□□□□□ -0.56
SKA1-201ENST00000285116 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms