RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ZBED3Q96IU2 234 aaPredicted RBP12.2□□□□□ -0.46
LRTM1-201ENST00000273286 ABI2Q9NYB9 513 aaPredicted RBP12.2□□□□□ -0.46
LRTM1-201ENST00000273286 GRM8O00222 908 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 IL1R1P14778 569 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 FOXO4P98177 505 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 ATP11AP98196 1134 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 SUPT20HL1Q3ZLR7 823 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 BEND3Q5T5X7 828 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 LDHAL6AQ6ZMR3 332 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
LRTM1-201ENST00000273286 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
LRTM1-201ENST00000273286 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
LRTM1-201ENST00000273286 ZBTB48P10074 688 aaPredicted RBP12.18□□□□□ -0.46
LRTM1-201ENST00000273286 KLRK1P26718 216 aa12.18□□□□□ -0.46
LRTM1-201ENST00000273286 EXOSC9Q06265 439 aaKnown RBP12.18□□□□□ -0.46
LRTM1-201ENST00000273286 PRAMEF18Q5VWM3 479 aa12.18□□□□□ -0.46
LRTM1-201ENST00000273286 MOB2Q70IA6 237 aa12.18□□□□□ -0.46
LRTM1-201ENST00000273286 HELQQ8TDG4 1101 aa12.18□□□□□ -0.46
LRTM1-201ENST00000273286 DEFB129Q9H1M3 183 aa12.18□□□□□ -0.46
LRTM1-201ENST00000273286 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
LRTM1-201ENST00000273286 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
LRTM1-201ENST00000273286 TNFAIP1Q13829 316 aa12.17□□□□□ -0.46
LRTM1-201ENST00000273286 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
LRTM1-201ENST00000273286 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
LRTM1-201ENST00000273286 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
LRTM1-201ENST00000273286 ZNF296Q8WUU4 475 aaPredicted RBP12.17□□□□□ -0.46
LRTM1-201ENST00000273286 SRA1Q9HD15 236 aaKnown RBP12.17□□□□□ -0.46
LRTM1-201ENST00000273286 CNNM1Q9NRU3 951 aa12.17□□□□□ -0.46
LRTM1-201ENST00000273286 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
LRTM1-201ENST00000273286 ANGEL1Q9UNK9 670 aaKnown RBP12.17□□□□□ -0.46
LRTM1-201ENST00000273286 TAF5LO75529 589 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 CYP2E1P05181 493 aaPredicted RBP12.16□□□□□ -0.46
LRTM1-201ENST00000273286 PTPN12Q05209 780 aaKnown RBP12.16□□□□□ -0.46
LRTM1-201ENST00000273286 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 SETDB1Q15047 1291 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 CEP135Q66GS9 1140 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 MEGF10Q96KG7 1140 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
LRTM1-201ENST00000273286 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
LRTM1-201ENST00000273286 SCO2A0A1W2PP80 73 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 F6X3S4 739 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 FKTNO75072 461 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 SMNDC1O75940 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRTM1-201ENST00000273286 CFAP100Q494V2 611 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 OTUD7BQ6GQQ9 843 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
LRTM1-201ENST00000273286 FBXO46Q6PJ61 603 aaPredicted RBP12.15□□□□□ -0.46
LRTM1-201ENST00000273286 ZNF438Q7Z4V0 828 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 CACTIN-AS1Q8N1I8 211 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 CERS5Q8N5B7 392 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 EDEM1Q92611 657 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 MRPL18Q9H0U6 180 aaKnown RBP12.15□□□□□ -0.46
LRTM1-201ENST00000273286 ELP3Q9H9T3 547 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 FAM205AQ6ZU69 1335 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 A0A1B0GUL6 1792 aa12.15□□□□□ -0.46
LRTM1-201ENST00000273286 PRKG1Q13976 671 aa12.14□□□□□ -0.47
LRTM1-201ENST00000273286 ANKRD13AQ8IZ07 590 aa12.14□□□□□ -0.47
LRTM1-201ENST00000273286 MUC3BQ9H195 1237 aa12.14□□□□□ -0.47
LRTM1-201ENST00000273286 RASSF4Q9H2L5 321 aa12.14□□□□□ -0.47
LRTM1-201ENST00000273286 AKTIPQ9H8T0 292 aa12.14□□□□□ -0.47
LRTM1-201ENST00000273286 PPME1Q9Y570 386 aa12.14□□□□□ -0.47
LRTM1-201ENST00000273286 LAMB1P07942 1786 aa12.13□□□□□ -0.47
LRTM1-201ENST00000273286 KIF4AO95239 1232 aa12.13□□□□□ -0.47
LRTM1-201ENST00000273286 RBM5P52756 815 aaKnown RBP eCLIP12.13□□□□□ -0.47
LRTM1-201ENST00000273286 SOX10P56693 466 aa12.13□□□□□ -0.47
LRTM1-201ENST00000273286 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
LRTM1-201ENST00000273286 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
LRTM1-201ENST00000273286 MROH5Q6ZUA9 1318 aa12.13□□□□□ -0.47
LRTM1-201ENST00000273286 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
LRTM1-201ENST00000273286 SNAP23O00161 211 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
LRTM1-201ENST00000273286 TNNI2P48788 182 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
LRTM1-201ENST00000273286 MFSD14BQ5SR56 506 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 TDRD7Q8NHU6 1098 aaKnown RBP12.12□□□□□ -0.47
LRTM1-201ENST00000273286 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
LRTM1-201ENST00000273286 VEZTQ9HBM0 779 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 UTYO14607 1347 aa12.12□□□□□ -0.47
LRTM1-201ENST00000273286 PLIN1O60240 522 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 ALX3O95076 343 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 MPSTP25325 297 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
LRTM1-201ENST00000273286 RASA3Q14644 834 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-201ENST00000273286 WNK4Q96J92 1243 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms