RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 DCCP43146 1447 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 BUB1O43683 1085 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 CXCR5P32302 372 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-201ENST00000272638 HLTFQ14527 1009 aaKnown RBP eCLIP13.99□□□□□ -0.173e-8■■□□□ 12.6
UBXN4-201ENST00000272638 ZNF658Q5TYW1 1059 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-201ENST00000272638 CNNM4Q6P4Q7 775 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 DHX37Q8IY37 1157 aaKnown RBP13.99□□□□□ -0.17
UBXN4-201ENST00000272638 CEP112Q8N8E3 955 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 TRIM10Q9UDY6 481 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 RGPD5Q99666 1765 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 SYCP3Q8IZU3 236 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 TC2NQ8N9U0 490 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 TAF4BQ92750 862 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 PPEF1O14829 653 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-201ENST00000272638 KRT83P78385 493 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 SMAP1Q8IYB5 467 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-201ENST00000272638 H7C1D1 291 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 TCP11X2Q5H9J9 407 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 RAD9BQ6WBX8 426 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
UBXN4-201ENST00000272638 TBC1D22AQ8WUA7 517 aa13.99□□□□□ -0.17
UBXN4-201ENST00000272638 A0A0U1RQJ8 604 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 MFAP3LO75121 409 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
UBXN4-201ENST00000272638 PABPC4Q13310 644 aaKnown RBP eCLIP13.98□□□□□ -0.174e-6■■■■□ 26.2
UBXN4-201ENST00000272638 RGS22Q8NE09 1264 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 ATRIPQ8WXE1 791 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
UBXN4-201ENST00000272638 PCP11498 1178 aaKnown RBP13.98□□□□□ -0.17
UBXN4-201ENST00000272638 OAS2P29728 719 aaKnown RBP13.98□□□□□ -0.17
UBXN4-201ENST00000272638 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
UBXN4-201ENST00000272638 JCADQ9P266 1359 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 GPBP1Q86WP2 473 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 PCDHA6Q9UN73 950 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 PCDHA8Q9Y5H6 950 aa13.98□□□□□ -0.17
UBXN4-201ENST00000272638 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L10C9JJH3 530 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 TACC1O75410 805 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 MMP10P09238 476 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 MAGEA1P43355 309 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 CERKLQ49MI3 558 aaPredicted RBP13.97□□□□□ -0.17
UBXN4-201ENST00000272638 NYAP1Q6ZVC0 841 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 KIFC2Q96AC6 838 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 ALS2CR12Q96Q35 445 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 PARD6BQ9BYG5 372 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 TTC26A0AVF1 554 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 ORC4O43929 436 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 RASA1P20936 1047 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 KLK7P49862 253 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 DPYDQ12882 1025 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 OGFOD1Q8N543 542 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 PODXL2Q9NZ53 605 aa13.97□□□□□ -0.17
UBXN4-201ENST00000272638 SORBS3O60504 671 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 KRT26Q7Z3Y9 468 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 LARP4BQ92615 738 aaKnown RBP13.96□□□□□ -0.17
UBXN4-201ENST00000272638 P2RX5Q93086 422 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 FAM107BQ9H098 131 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 SFI1A8K8P3 1242 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 ADAMTS3O15072 1205 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
UBXN4-201ENST00000272638 BCCIPQ9P287 314 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBXN4-201ENST00000272638 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
UBXN4-201ENST00000272638 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.18
UBXN4-201ENST00000272638 ICA1Q05084 483 aa13.96□□□□□ -0.18
UBXN4-201ENST00000272638 STK4Q13043 487 aa13.96□□□□□ -0.18
UBXN4-201ENST00000272638 TPH2Q8IWU9 490 aa13.96□□□□□ -0.18
UBXN4-201ENST00000272638 LZTS2Q9BRK4 669 aa13.96□□□□□ -0.18
UBXN4-201ENST00000272638 GBP3Q9H0R5 595 aa13.96□□□□□ -0.18
UBXN4-201ENST00000272638 ADGRG1Q9Y653 693 aa13.96□□□□□ -0.18
UBXN4-201ENST00000272638 EFCAB8A8MWE9 144 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 TUBB4AP04350 444 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 SMC1AQ14683 1233 aaKnown RBP13.95□□□□□ -0.18
UBXN4-201ENST00000272638 CCDC65Q8IXS2 484 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBXN4-201ENST00000272638 AFF2P51816 1311 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 STAT3P40763 770 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 DNM2P50570 870 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 GRM4Q14833 912 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 ERMNQ8TAM6 284 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 RAD17O75943 681 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 FLT1P17948 1338 aa13.95□□□□□ -0.18
UBXN4-201ENST00000272638 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
UBXN4-201ENST00000272638 BBOX1O75936 387 aa13.94□□□□□ -0.18
UBXN4-201ENST00000272638 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
UBXN4-201ENST00000272638 TTLL1O95922 423 aa13.94□□□□□ -0.18
UBXN4-201ENST00000272638 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
UBXN4-201ENST00000272638 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms