RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 PFKFB1P16118 471 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 TRAPPC10P48553 1259 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 MRPL12P52815 198 aaKnown RBP18.4■□□□□ 0.54
PCTP-201ENST00000268896 ZNF445P59923 1031 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 CKAP2LQ8IYA6 745 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 LPAR1Q92633 364 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 WDR18Q9BV38 432 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 SNCAIPQ9Y6H5 919 aa18.4■□□□□ 0.54
PCTP-201ENST00000268896 CCNT1O60563 726 aaKnown RBP18.39■□□□□ 0.53
PCTP-201ENST00000268896 FLOT1O75955 427 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 PTPREP23469 700 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 USP14P54578 494 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 FAM160A1Q05DH4 1040 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
PCTP-201ENST00000268896 NOL9Q5SY16 702 aaKnown RBP18.39■□□□□ 0.53
PCTP-201ENST00000268896 MAP1SQ66K74 1059 aaPredicted RBP18.39■□□□□ 0.53
PCTP-201ENST00000268896 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 RANBP17Q9H2T7 1088 aaKnown RBP18.39■□□□□ 0.53
PCTP-201ENST00000268896 DDX19AQ9NUU7 478 aaKnown RBP18.39■□□□□ 0.53
PCTP-201ENST00000268896 CMA1P23946 247 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 NF2P35240 595 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 ENGASEQ8NFI3 743 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 SLF1Q9BQI6 1058 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 CSRNP2Q9H175 543 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 CLSTN2Q9H4D0 955 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 ZNF408Q9H9D4 720 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 ELP3Q9H9T3 547 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 SRPRBQ9Y5M8 271 aaKnown RBP18.39■□□□□ 0.53
PCTP-201ENST00000268896 CSADQ9Y600 493 aa18.39■□□□□ 0.53
PCTP-201ENST00000268896 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
PCTP-201ENST00000268896 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
PCTP-201ENST00000268896 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
PCTP-201ENST00000268896 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
PCTP-201ENST00000268896 IREB2P48200 963 aaKnown RBP18.38■□□□□ 0.53
PCTP-201ENST00000268896 MRE11P49959 708 aa18.38■□□□□ 0.53
PCTP-201ENST00000268896 LRSAM1Q6UWE0 723 aa18.38■□□□□ 0.53
PCTP-201ENST00000268896 PNMA8AQ86V59 439 aaPredicted RBP18.38■□□□□ 0.53
PCTP-201ENST00000268896 FMR1NBQ8N0W7 255 aaPredicted RBP18.38■□□□□ 0.53
PCTP-201ENST00000268896 ZNF526Q8TF50 670 aaPredicted RBP18.38■□□□□ 0.53
PCTP-201ENST00000268896 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
PCTP-201ENST00000268896 OTOFQ9HC10 1997 aa18.38■□□□□ 0.53
PCTP-201ENST00000268896 WDR90Q96KV7 1748 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 CLK2P49760 499 aaKnown RBP18.37■□□□□ 0.53
PCTP-201ENST00000268896 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
PCTP-201ENST00000268896 RESP18Q5W5W9 173 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 NEK8Q86SG6 692 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 CPXCR1Q8N123 301 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 AFG3L2Q9Y4W6 797 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 TRAF5O00463 557 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 PLA2G6O60733 806 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 HOXA13P31271 388 aaPredicted RBP18.37■□□□□ 0.53
PCTP-201ENST00000268896 ERCC4Q92889 916 aaPredicted RBP18.37■□□□□ 0.53
PCTP-201ENST00000268896 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
PCTP-201ENST00000268896 BMP15O95972 392 aa18.36■□□□□ 0.53
PCTP-201ENST00000268896 MAP3K11Q16584 847 aa18.36■□□□□ 0.53
PCTP-201ENST00000268896 USP49Q70CQ1 688 aa18.36■□□□□ 0.53
PCTP-201ENST00000268896 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
PCTP-201ENST00000268896 MEIS2O14770 477 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 OPLAHO14841 1288 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 ZNF202O95125 648 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 SYKP43405 635 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 IL17AQ16552 155 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 LDHDQ86WU2 507 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 TBC1D5Q92609 795 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 WNK4Q96J92 1243 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 RAVER2Q9HCJ3 691 aaKnown RBP18.35■□□□□ 0.53
PCTP-201ENST00000268896 TMOD4Q9NZQ9 345 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 TDP2O95551 362 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 CFBP00751 764 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 P2RX7Q99572 595 aaKnown RBP18.35■□□□□ 0.53
PCTP-201ENST00000268896 CCPG1Q9ULG6 757 aa18.35■□□□□ 0.53
PCTP-201ENST00000268896 CTDP1Q9Y5B0 961 aaPredicted RBP18.35■□□□□ 0.53
PCTP-201ENST00000268896 LETM1O95202 739 aaPredicted RBP18.34■□□□□ 0.53
PCTP-201ENST00000268896 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 PDILTQ8N807 584 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 ATG4CQ96DT6 458 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 EPSTI1Q96J88 318 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 ANO3Q9BYT9 981 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 HOMER2Q9NSB8 354 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 FAM13BQ9NYF5 915 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 KCNH3Q9ULD8 1083 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 PPP1R9AQ9ULJ8 1098 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 HPSEQ9Y251 543 aa18.34■□□□□ 0.53
PCTP-201ENST00000268896 C19orf81C9J6K1 198 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 EDIL3O43854 480 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 FCHSD1Q86WN1 690 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 FERMT2Q96AC1 680 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 UIMC1Q96RL1 719 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 SDF4Q9BRK5 362 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 TSPY26PQ9H489 355 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 ZNF536O15090 1300 aa18.33■□□□□ 0.53
PCTP-201ENST00000268896 NEMFO60524 1076 aa18.33■□□□□ 0.52
PCTP-201ENST00000268896 ANKRD13AQ8IZ07 590 aa18.33■□□□□ 0.52
PCTP-201ENST00000268896 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms