RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SPOPO43791 374 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PEX19P40855 299 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 EDEM3Q9BZQ6 932 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 SERTAD1Q9UHV2 236 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 LGALS16A8MUM7 142 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 CASQ2O14958 399 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 N4BP1O75113 896 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PSMD14O00487 310 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 DCTN3O75935 186 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 ZNF131P52739 623 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 DZIP3Q86Y13 1208 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 ZWINTO95229 277 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 FAM129AQ9BZQ8 928 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 MMP1P03956 469 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 PHKBQ93100 1093 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 FAM207AQ9NSI2 230 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 TULP4Q9NRJ4 1543 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 hCG_1984214I3L0E3 225 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 ZNF713Q8N859 430 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 CCDC105Q8IYK2 499 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 KLHL29Q96CT2 875 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 FUT8Q9BYC5 575 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 GMNCA6NCL1 334 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 FAM107AO95990 144 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 USP6P35125 1406 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 PPP1R37O75864 691 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 HHATQ5VTY9 493 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 PROM2Q8N271 834 aa12.81□□□□□ -0.36
DNMT3A-201ENST00000264709 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 KCTD16Q68DU8 428 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 FGFR1OP2Q9NVK5 253 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 TOB2Q14106 344 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 DBN1Q16643 649 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 NBPF20Q3BBV1 942 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 B4E1Z4 1266 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 CYP7A1P22680 504 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 FANCBQ8NB91 859 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 PRPF6O94906 941 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 STAT1P42224 750 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 ZNF654Q8IZM8 581 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 RIC8AQ9NPQ8 531 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 ASIC3Q9UHC3 531 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 PABPN1LA6NDY0 278 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 KRT31Q15323 416 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 USP27XA6NNY8 438 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 LRIG3Q6UXM1 1119 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 TRIM42Q8IWZ5 723 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 SUFUQ9UMX1 484 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 KCNK3O14649 394 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 CREB3O43889 395 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 ANXA1P04083 346 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 TEX9Q8N6V9 391 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 IMPG2Q9BZV3 1241 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 ZNF174Q15697 407 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
DNMT3A-201ENST00000264709 SMTNP53814 917 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 HIBCHQ6NVY1 386 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 USHBP1Q8N6Y0 703 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 FOXO3O43524 673 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 RAB3IL1Q8TBN0 382 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 TRIM66O15016 1216 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 KCNB2Q92953 911 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 ATP2A3Q93084 1043 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 SGSM3Q96HU1 749 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 FKBP3Q00688 224 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 TCP11X2Q5H9J9 407 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 KLHL7Q8IXQ5 586 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 XAGE2Q96GT9 111 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 TUBE1Q9UJT0 475 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 YTHDF3Q7Z739 585 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 STK17AQ9UEE5 414 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 NONOQ15233 471 aaKnown RBP eCLIP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 SLIT1O75093 1534 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 THAP12O43422 761 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms