RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CCDC66A2RUB6 948 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 RCCD1A6NED2 376 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 SMCO2A6NFE2 343 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 ATP1A1P05023 1023 aaKnown RBP18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 TRIM21P19474 475 aaKnown RBP18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 EEF1GP26641 437 aaKnown RBP18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 HNRNPH2P55795 449 aaKnown RBP18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 STIM1Q13586 685 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 CCDC122Q5T0U0 273 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 TRIM9Q9C026 710 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 UBA5Q9GZZ9 404 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 THAP9Q9H5L6 903 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 DUSP10Q9Y6W6 482 aa18.33■□□□□ 0.53
TM9SF1-201ENST00000261789 ERCC3P19447 782 aa18.33■□□□□ 0.52
TM9SF1-201ENST00000261789 ASIC1P78348 528 aa18.33■□□□□ 0.52
TM9SF1-201ENST00000261789 DAGLBQ8NCG7 672 aa18.33■□□□□ 0.52
TM9SF1-201ENST00000261789 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
TM9SF1-201ENST00000261789 TCP11L1Q9NUJ3 509 aa18.33■□□□□ 0.52
TM9SF1-201ENST00000261789 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
TM9SF1-201ENST00000261789 BAG3O95817 575 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 TBC1D8BQ0IIM8 1120 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 WHAMMP3Q1A5X7 153 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 AMOTL1Q8IY63 956 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 PCMTD1Q96MG8 357 aaPredicted RBP18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 EYA3Q99504 573 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 LACRTQ9GZZ8 138 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 TMEM260Q9NX78 707 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 CDK8P49336 464 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 CNOT6LQ96LI5 555 aaKnown RBP18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 ZMYND12Q9H0C1 365 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 MYO1AQ9UBC5 1043 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 L1RE1Q9UN81 338 aa18.32■□□□□ 0.52
TM9SF1-201ENST00000261789 A0A1W2PQC6 194 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 SRGNP10124 158 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 DNM2P50570 870 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 TSR1Q2NL82 804 aaKnown RBP18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 HNRNPLLQ8WVV9 542 aaKnown RBP18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 PIGSQ96S52 555 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 ADAM21Q9UKJ8 722 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 BTDP43251 543 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 FAM193AP78312 1265 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 TUBB2AQ13885 445 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 TBCKQ8TEA7 893 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 P2RX5Q93086 422 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 TRERF1Q96PN7 1200 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 MMTAG2Q9BU76 263 aaKnown RBP18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 TTYH3Q9C0H2 523 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 SLC39A2Q9NP94 309 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 RTCBQ9Y3I0 505 aaKnown RBP18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 MAST2Q6P0Q8 1798 aa18.31■□□□□ 0.52
TM9SF1-201ENST00000261789 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 TXKP42681 527 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 NONOQ15233 471 aaKnown RBP eCLIP18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 HDXQ7Z353 690 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 TRAPPC11Q7Z392 1133 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 KIAA1328Q86T90 577 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 MMS19Q96T76 1030 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 ZBTB22O15209 634 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 PRPHP41219 470 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 KIAA0895Q8NCT3 520 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 DHTKD1Q96HY7 919 aaPredicted RBP18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 C8orf37Q96NL8 207 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 HAUS4Q9H6D7 363 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 MYH1P12882 1939 aa18.3■□□□□ 0.52
TM9SF1-201ENST00000261789 PLEKP08567 350 aaPredicted RBP18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 CCNE1P24864 410 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 VPS72Q15906 364 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 MIIPQ5JXC2 388 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 NEK8Q86SG6 692 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 NOC4LQ9BVI4 516 aaKnown RBP18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 VPS18Q9P253 973 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 TNRC6CQ9HCJ0 1690 aaKnown RBP18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 FRMPD2Q68DX3 1309 aaPredicted RBP18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 POTEB2H3BUK9 544 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 LAD1O00515 517 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 ZNF185O15231 689 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 PHACTR2O75167 634 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 PPP4CP60510 307 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 KRT26Q7Z3Y9 468 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 NGLY1Q96IV0 654 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 HINFPQ9BQA5 517 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 SEMA6BQ9H3T3 888 aa18.29■□□□□ 0.52
TM9SF1-201ENST00000261789 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 MACROD2A1Z1Q3 448 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 PSMD14O00487 310 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 ERLIN1O75477 346 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms